CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 3
cytosol 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38185	Soybean	cytosol, nucleus	44.86	92.91
KRH53847	Soybean	nucleus	53.77	77.34
KRH64103	Soybean	mitochondrion	68.49	67.11
KRH67071	Soybean	extracellular, mitochondrion, plastid, vacuole	13.36	55.71
VIT_04s0044g00490.t01	Wine grape	mitochondrion	46.58	47.72
Solyc11g005400.1.1	Tomato	mitochondrion	41.78	43.57
PGSC0003DMT400010185	Potato	mitochondrion	41.78	43.57
Zm00001d002891_P001	Maize	cytosol	20.89	37.89
GSMUA_Achr8P17360_001	Banana	endoplasmic reticulum, extracellular	26.03	36.19
KXG21031	Sorghum	plastid	29.11	35.56
Os05t0106500-01	Rice	mitochondrion	27.74	35.22
GSMUA_Achr8P07930_001	Banana	nucleus	26.71	34.82
TraesCS1B01G024600.1	Wheat	mitochondrion, plastid	27.74	34.76
Os04t0687300-01	Rice	mitochondrion	31.85	33.94
AT2G18465.1	Thale cress	mitochondrion, nucleus, plastid	30.48	33.21
TraesCS1D01G020100.1	Wheat	mitochondrion	26.03	32.76
KRH38097	Soybean	cytosol	20.55	32.43
TraesCS2A01G576600.1	Wheat	nucleus	30.14	32.12
TraesCS2D01G587300.1	Wheat	mitochondrion, nucleus	29.79	31.87
TraesCS2B01G610800.1	Wheat	mitochondrion, nucleus	29.79	31.87
Zm00001d035721_P002	Maize	mitochondrion	28.77	31.82
KXG27496	Sorghum	nucleus	31.16	31.82
HORVU1Hr1G002830.2	Barley	plastid	27.74	29.24
KRG95387	Soybean	plastid	25.34	29.13
HORVU2Hr1G124560.2	Barley	cytosol, nucleus, plastid	29.79	28.81
KRH71846	Soybean	mitochondrion	22.26	26.97
TraesCS1A01G020600.1	Wheat	plastid	27.74	24.92

Protein Annotations

EMBL:ACUP02005743	EnsemblPlants:KRH38183	EnsemblPlantsGene:GLYMA_09G116600	EntrezGene:100787858	Gene3D:1.10.287.110	InterPro:DnaJ_domain
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076
ProteinID:KRH38183	ProteinID:KRH38183.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000294E4BE	UniProt:K7LDB8	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:27016092..27022680

Molecular Weight (calculated)

33393.0 Da

IEP (calculated)

9.269

GRAVY (calculated)

-0.907

Length

292 amino acids

Sequence
(BLAST)

001: MTPVGLVVLV EILLFLEDCP HSKPLSSSFD MQLARWRNLL SPKTHAIPSL MHFSEFHSEF HSTPYSCQKW NNKFNSDVKK CQQPSKNHIK FITRQKRADA
101: KKALNSLLYN NGASKFSFEE KCGYQGRFSN KGQPKSGQHS GGKPQKKSKR KIRRECFSED FDGHTEQIFQ ATFGNKWYTW SFNNWSSSSS EHSTSGFEWR
201: EHSNRTSKWK NESDTEHEDD DSCCEGSSSD RTVLGLPPTG PLKIEDVKNA FRLSALKWHP DKHQGPSQAM AEEKFKLCVN AYKTLCNALS PS

Best Arabidopsis Sequence Match ( AT2G18465.1 )
(BLAST)

001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.