CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67071	Soybean	extracellular, mitochondrion, plastid, vacuole	25.41	67.14
KRH71846	Soybean	mitochondrion	74.59	57.26
KRG95387	Soybean	plastid	61.08	44.49
Solyc03g063350.2.1	Tomato	cytosol	44.32	43.62
VIT_08s0007g06530.t01	Wine grape	plastid	54.05	38.31
KRH38185	Soybean	cytosol, nucleus	27.57	36.17
GSMUA_Achr11P...	Banana	nucleus	38.38	33.97
Bra007374.1-P	Field mustard	cytosol	28.65	30.11
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	40.0	28.68
TraesCS1D01G251000.1	Wheat	mitochondrion	39.46	28.29
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	40.0	28.24
CDX79893	Canola	mitochondrion, nucleus, plastid	39.46	28.19
KRH53847	Soybean	nucleus	30.81	28.08
CDY65802	Canola	mitochondrion, nucleus, plastid	41.08	28.04
HORVU1Hr1G061530.1	Barley	plastid	41.08	27.74
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	38.92	27.38
Os07t0470800-00	Rice	mitochondrion	37.3	27.17
Zm00001d021350_P003	Maize	plastid	37.84	27.13
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	40.0	27.11
CDY06886	Canola	mitochondrion, nucleus, plastid	37.3	26.95
KXG36196	Sorghum	plastid	36.76	26.46
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	33.51	24.41
CDY06058	Canola	plastid	32.97	23.74
CDX71980	Canola	plastid	25.95	21.24
KRH38183	Soybean	extracellular, plasma membrane	32.43	20.55
AT2G42065.1	Thale cress	plastid	23.24	20.48
KRH64103	Soybean	mitochondrion	25.95	16.11
CDY14812	Canola	mitochondrion, nucleus, plastid	37.84	12.32
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	15.68	5.59

Protein Annotations

EMBL:ACUP02005612	EnsemblPlants:KRH38097	EnsemblPlantsGene:GLYMA_09G111100	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ProteinID:KRH38097	ProteinID:KRH38097.1	SUPFAM:SSF46565	UniParc:UPI0006EDFE98	UniProt:A0A0R0I6W3	MapMan:35.2

Description

hypothetical protein

Coordinates

chr9:-:22004747..22005784

Molecular Weight (calculated)

21414.8 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.832

Length

185 amino acids

Sequence
(BLAST)

001: MLHLKFMCFP FSCLPSWKED DDEDGPSPSQ GPSWFRKQYS PKGSGRHIFC KDDFDVETVF WSVFGGNRSY YWSFINEENP QWRSGGFSNH EKSWNWRRRS
101: ENEYNGTSTE PESDCSHSDL ISDRLALGLG ASGPLKLEDV KNVYRICALK WHPDRHHGSF KVIAEEKLKH CSAAYRPLSD KLALD

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.