Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65802 | Canola | mitochondrion, nucleus, plastid | 83.78 | 80.07 |
| AT2G42080.1 | Thale cress | mitochondrion, nucleus, plastid | 73.75 | 72.62 |
| CDY06886 | Canola | mitochondrion, nucleus, plastid | 66.41 | 67.19 |
| VIT_08s0007g06530.t01 | Wine grape | plastid | 45.56 | 45.21 |
| KRH71846 | Soybean | mitochondrion | 41.31 | 44.4 |
| KRG95387 | Soybean | plastid | 42.08 | 42.91 |
| Solyc03g063350.2.1 | Tomato | cytosol | 28.96 | 39.89 |
| KRH38097 | Soybean | cytosol | 28.19 | 39.46 |
| CDY06058 | Canola | plastid | 39.0 | 39.3 |
| GSMUA_Achr11P... | Banana | nucleus | 30.89 | 38.28 |
| CDX71980 | Canola | plastid | 31.66 | 36.28 |
| TraesCS1B01G262100.2 | Wheat | mitochondrion, nucleus, plastid | 33.98 | 34.11 |
| Os07t0470800-00 | Rice | mitochondrion | 33.2 | 33.86 |
| TraesCS1D01G251000.1 | Wheat | mitochondrion | 33.2 | 33.33 |
| Zm00001d021350_P003 | Maize | plastid | 32.82 | 32.95 |
| KXG36196 | Sorghum | plastid | 32.43 | 32.68 |
| TraesCS1A01G251500.1 | Wheat | mitochondrion, nucleus, plastid | 33.98 | 32.23 |
| HORVU1Hr1G061530.1 | Barley | plastid | 33.59 | 31.75 |
| CDY14812 | Canola | mitochondrion, nucleus, plastid | 67.18 | 30.63 |
Protein Annotations
| EnsemblPlants:CDX79893 | EnsemblPlantsGene:GSBRNA2T00132745001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45376 | PFAM:PF00226 | PFscan:PS50076 | ProteinID:CDX79893 | ProteinID:CDX79893.1 |
| SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EE9BA6 | MapMan:35.2 | : |
Description
BnaA05g02630D
Coordinates
chrLK031819:+:730031..731832
Molecular Weight (calculated)
30301.9 Da
IEP (calculated)
9.603
GRAVY (calculated)
-1.192
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAAIRAAIQ RPQSLASHLK TALFHSTPVL ERKRRTSWES RSYVHKKRNR RMREKQELLR NVNAFAANMF PSWHDDGYDD DDEPSSRKQK SWYKKKYAKK
101: ETKGKWDPRH FDFCEADDDF DIDYVFRTAF GGPRGFSFSF TFEEDEPPRW HHRDHSSRFS NNSKKSWRSK HRIYEDEDGY TSTESSDSES EPNQASHRQA
201: LGLSPSGPLN LKEVKNAFRT CALKWHPDRH QGSSKEAAEA KFKLCSVAYE SLCEKLAVN
101: ETKGKWDPRH FDFCEADDDF DIDYVFRTAF GGPRGFSFSF TFEEDEPPRW HHRDHSSRFS NNSKKSWRSK HRIYEDEDGY TSTESSDSES EPNQASHRQA
201: LGLSPSGPLN LKEVKNAFRT CALKWHPDRH QGSSKEAAEA KFKLCSVAYE SLCEKLAVN
001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.