Factsheet for Zm00001d021350_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36196	Sorghum	plastid	87.98	88.33
Os07t0470800-00	Rice	mitochondrion	73.26	74.41
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	71.71	71.71
TraesCS1D01G251000.1	Wheat	mitochondrion	71.32	71.32
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	71.71	67.77
HORVU1Hr1G061530.1	Barley	plastid	70.93	66.79
GSMUA_Achr11P...	Banana	nucleus	35.27	43.54
VIT_08s0007g06530.t01	Wine grape	plastid	41.86	41.38
KRH71846	Soybean	mitochondrion	36.05	38.59
KRG95387	Soybean	plastid	37.6	38.19
KRH38097	Soybean	cytosol	27.13	37.84
Solyc03g063350.2.1	Tomato	cytosol	27.13	37.23
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	34.5	33.97
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	34.5	33.84
CDX79893	Canola	mitochondrion, nucleus, plastid	32.95	32.82
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	32.17	32.68
CDY06886	Canola	mitochondrion, nucleus, plastid	32.17	32.42
CDY06058	Canola	plastid	31.78	31.91
CDX71980	Canola	plastid	27.91	31.86
Zm00001d002891_P001	Maize	cytosol	19.77	31.68
CDY65802	Canola	mitochondrion, nucleus, plastid	32.95	31.37
Bra007374.1-P	Field mustard	cytosol	20.93	30.68
AT2G42065.1	Thale cress	plastid	24.81	30.48
Zm00001d035721_P002	Maize	mitochondrion	18.22	17.8
CDY14812	Canola	mitochondrion, nucleus, plastid	33.72	15.32
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	16.67	8.29

Protein Annotations

EMBL:BT061371	EnsemblPlants:Zm00001d021350_P003	EnsemblPlants:Zm00001d021350_T003	EnsemblPlantsGene:Zm00001d021350	EntrezGene:100381482	Gene3D:1.10.287.110
InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ProteinID:ONM56937.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0001948756	UniProt:C0HGB5	MapMan:35.2	:	:	:

Description

Chaperone DnaJ-domain superfamily protein

Coordinates

chr7:+:149680769..149689844

Molecular Weight (calculated)

29899.2 Da

IEP (calculated)

10.005

GRAVY (calculated)

-1.091

Length

258 amino acids

Sequence
(BLAST)

001: MNSIKSAIFS GHRSHPHVGA AAVPQQQLGS TASFHSTPIL QRKHKTQWHN RFNYYTRRRR NRETKRSMLR NMSEYAESLF QSWRDEDEKN AASAGPSWFR
101: GHRWVRNSSN NGFRTHDFYY GNFKSKGGFE FCTSDEDEPE NLFRNVFRDQ HTYYWSFSSD NFQRNSKRAR SQKSRNWSFE TDEEDEVSAP SEVSLARQAL
201: GLSTSGPLKL EDVKSAYRAC ALRWHPDRHN GSSKSTAEEK FKHCSAAYKT LCDSLAAA

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.