Factsheet for TraesCS1A01G251500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	93.41	98.84
TraesCS1D01G251000.1	Wheat	mitochondrion	93.04	98.45
HORVU1Hr1G061530.1	Barley	plastid	89.01	88.69
Os07t0470800-00	Rice	mitochondrion	72.53	77.95
Zm00001d021350_P003	Maize	plastid	67.77	71.71
KXG36196	Sorghum	plastid	65.93	70.04
GSMUA_Achr11P...	Banana	nucleus	35.16	45.93
VIT_08s0007g06530.t01	Wine grape	plastid	41.39	43.3
Solyc03g063350.2.1	Tomato	cytosol	28.57	41.49
KRH71846	Soybean	mitochondrion	36.26	41.08
KRG95387	Soybean	plastid	37.36	40.16
KRH38097	Soybean	cytosol	27.11	40.0
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	34.8	36.12
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	34.43	35.88
CDY06886	Canola	mitochondrion, nucleus, plastid	32.23	34.38
CDY65802	Canola	mitochondrion, nucleus, plastid	34.07	34.32
CDX79893	Canola	mitochondrion, nucleus, plastid	32.23	33.98
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	31.14	33.46
CDY06058	Canola	plastid	30.4	32.3
CDX71980	Canola	plastid	26.01	31.42
AT2G42065.1	Thale cress	plastid	22.71	29.52
Bra007374.1-P	Field mustard	cytosol	18.68	28.98
TraesCS2A01G576600.1	Wheat	nucleus	23.81	23.72
CDY14812	Canola	mitochondrion, nucleus, plastid	33.7	16.2
TraesCS1A01G020600.1	Wheat	plastid	18.68	15.69
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	17.22	9.06

Protein Annotations

EnsemblPlants:TraesCS1A01G251500.1	EnsemblPlantsGene:TraesCS1A01G251500	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1A:-:443125061..443133281

Molecular Weight (calculated)

31733.6 Da

IEP (calculated)

9.695

GRAVY (calculated)

-1.016

Length

273 amino acids

Sequence
(BLAST)

001: MNHVKSALLS GHRPHRLAAA APQQLAATAS FHSTPPLQRK RKTQWQHMLL NIGFLKVNLD VLRFNFYAKR RRNRDTKRTM IRNMSEYAEQ LFNSWRDEDE
101: KKDASSGPSW FRGHRWVRDS RNNGFRPHEF FYDTVKSRGG FEFCTSDDDD EPETVFRNAF RGNQHTYYWS FESDDFPRRN SRRSHSESSG HWSYETDDEG
201: EISTQTEVSV ARQALGLSTS GPLKLEDVKS AYRTCALRWH PDRHHGSSKA TAEEKFKRCS AAYQTLCDSL ATA

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.