Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G020100.1 | Wheat | mitochondrion | 66.46 | 93.1 |
| TraesCS1B01G024600.1 | Wheat | mitochondrion, plastid | 64.0 | 89.27 |
| HORVU1Hr1G002830.2 | Barley | plastid | 59.69 | 70.04 |
| Os05t0106500-01 | Rice | mitochondrion | 44.92 | 63.48 |
| KXG21031 | Sorghum | plastid | 46.15 | 62.76 |
| Zm00001d035721_P002 | Maize | mitochondrion | 46.46 | 57.2 |
| GSMUA_Achr8P17360_001 | Banana | endoplasmic reticulum, extracellular | 22.46 | 34.76 |
| KRH38185 | Soybean | cytosol, nucleus | 15.08 | 34.75 |
| KRH53847 | Soybean | nucleus | 19.08 | 30.54 |
| TraesCS2A01G576600.1 | Wheat | nucleus | 24.31 | 28.83 |
| KRH38183 | Soybean | extracellular, plasma membrane | 24.92 | 27.74 |
| VIT_04s0044g00490.t01 | Wine grape | mitochondrion | 23.69 | 27.02 |
| AT2G18465.1 | Thale cress | mitochondrion, nucleus, plastid | 21.54 | 26.12 |
| PGSC0003DMT400010185 | Potato | mitochondrion | 20.62 | 23.93 |
| Solyc11g005400.1.1 | Tomato | mitochondrion | 20.31 | 23.57 |
| KRH64103 | Soybean | mitochondrion | 21.54 | 23.49 |
| TraesCS1A01G251500.1 | Wheat | mitochondrion, nucleus, plastid | 15.69 | 18.68 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G020600.1 | EnsemblPlantsGene:TraesCS1A01G020600 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45376 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1A:-:10069852..10072312
Molecular Weight (calculated)
35990.1 Da
IEP (calculated)
10.762
GRAVY (calculated)
-0.945
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MWCATYIHCS RPTRQKAQAR APRTNPPCLI RKNKRTNPLS AEHATALIYL SRPSPATPTG SCRLTLPISP THLVHRRRRQ IPHTLPSSSP GMQAAARRGV
101: AAAAAASASA SFHSTAAALS KSTPRIRFNV REKRTDAKNA LKNVLLNGGP SQERCNKQTR QQKAGGKSKV RSGPGSNPYS KGRGGIDWRN FDGDDSSDSP
201: YGSFGGKTSF TWYWPGEEDD DDLPNGFQWR EEPRPNKSRE KVWNESDVDE EEAPRRDDLK SHRISLGLPV LGPLKLDHIK SAFRASALKW HPDKHQGSSQ
301: AEAEDKFRRC VEAYNALSGA FKRSS
101: AAAAAASASA SFHSTAAALS KSTPRIRFNV REKRTDAKNA LKNVLLNGGP SQERCNKQTR QQKAGGKSKV RSGPGSNPYS KGRGGIDWRN FDGDDSSDSP
201: YGSFGGKTSF TWYWPGEEDD DDLPNGFQWR EEPRPNKSRE KVWNESDVDE EEAPRRDDLK SHRISLGLPV LGPLKLDHIK SAFRASALKW HPDKHQGSSQ
301: AEAEDKFRRC VEAYNALSGA FKRSS
001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.