CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53847	Soybean	nucleus	87.23	60.59
KRH67071	Soybean	extracellular, mitochondrion, plastid, vacuole	27.66	55.71
KRH38183	Soybean	extracellular, plasma membrane	92.91	44.86
KRH64103	Soybean	mitochondrion	80.14	37.92
Zm00001d002891_P001	Maize	cytosol	39.72	34.78
GSMUA_Achr8P17360_001	Banana	endoplasmic reticulum, extracellular	50.35	33.81
VIT_04s0044g00490.t01	Wine grape	mitochondrion	64.54	31.93
Solyc11g005400.1.1	Tomato	mitochondrion	58.87	29.64
PGSC0003DMT400010185	Potato	mitochondrion	58.87	29.64
KRH38097	Soybean	cytosol	36.17	27.57
GSMUA_Achr8P07930_001	Banana	nucleus	43.26	27.23
Os05t0106500-01	Rice	mitochondrion	40.43	24.78
KXG21031	Sorghum	plastid	39.72	23.43
AT2G18465.1	Thale cress	mitochondrion, nucleus, plastid	43.26	22.76
KRH71846	Soybean	mitochondrion	37.59	21.99
Os04t0687300-01	Rice	mitochondrion	42.55	21.9
TraesCS2A01G576600.1	Wheat	nucleus	42.55	21.9
TraesCS1B01G024600.1	Wheat	mitochondrion, plastid	36.17	21.89
TraesCS2D01G587300.1	Wheat	mitochondrion, nucleus	41.84	21.61
TraesCS2B01G610800.1	Wheat	mitochondrion, nucleus	41.84	21.61
KRG95387	Soybean	plastid	38.3	21.26
Zm00001d035721_P002	Maize	mitochondrion	39.72	21.21
TraesCS1D01G020100.1	Wheat	mitochondrion	34.04	20.69
KXG27496	Sorghum	nucleus	41.84	20.63
HORVU2Hr1G124560.2	Barley	cytosol, nucleus, plastid	41.13	19.21
HORVU1Hr1G002830.2	Barley	plastid	34.75	17.69
TraesCS1A01G020600.1	Wheat	plastid	34.75	15.08

Protein Annotations

EMBL:ACUP02005743	EnsemblPlants:KRH38185	EnsemblPlantsGene:GLYMA_09G116800	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	ProteinID:KRH38185
ProteinID:KRH38185.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002951C38	UniProt:K7LDC0
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:27026406..27027932

Molecular Weight (calculated)

16290.6 Da

IEP (calculated)

6.233

GRAVY (calculated)

-1.030

Length

141 amino acids

Sequence
(BLAST)

001: KIRRECFFED FDGHEQIFQA TFGNKWYTWS FNNWRSSSSE HSTSGFEWRE HSNRTNKWKN ESDTEHEDDD SCCEGSSSDR TVLGLPPTGP LKIEDVKNAI
101: RLSALKWHPD KHQGPSQAMA EEKFKLCVNA YKTLCNALSP S

Best Arabidopsis Sequence Match ( AT2G18465.1 )
(BLAST)

001: MFRLRSLLSL KSSSIVELSS QNVTEAIRFA PFHSTSVLSE KSRSRFGSAR DSEGERSSKN SSIRFTCTVK EKGRTSAKKT VDKLLFHRGI NDPLQNEWHF
101: GPSPLIRDRH MKKKSPPGRG KKPRDKKTKR WHREGNPDDD FGTDANNTFE NKWRERWTAQ SQKASYSKDS TAGFEWREGW SWTTQSQRSK SWNKESFDEP
201: LNVEFRSERI VLGLPLDGPI KVDDVKNAFR SSALKWHPDK HQGPSQVAAQ EKFKLCVDAY KSLCSALA

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L763]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.