CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38097	Soybean	cytosol	57.26	74.59
KRH67071	Soybean	extracellular, mitochondrion, plastid, vacuole	21.58	74.29
KRG95387	Soybean	plastid	61.83	58.66
VIT_08s0007g06530.t01	Wine grape	plastid	58.51	54.02
Solyc03g063350.2.1	Tomato	cytosol	35.68	45.74
AT2G42080.1	Thale cress	mitochondrion, nucleus, plastid	46.89	42.97
Bra004669.1-P	Field mustard	mitochondrion, nucleus, plastid	46.06	42.37
CDY65802	Canola	mitochondrion, nucleus, plastid	46.47	41.33
CDX79893	Canola	mitochondrion, nucleus, plastid	44.4	41.31
GSMUA_Achr11P...	Banana	nucleus	35.68	41.15
CDY06886	Canola	mitochondrion, nucleus, plastid	43.57	41.02
Os07t0470800-00	Rice	mitochondrion	41.08	38.98
TraesCS1B01G262100.2	Wheat	mitochondrion, nucleus, plastid	41.08	38.37
TraesCS1D01G251000.1	Wheat	mitochondrion	40.66	37.98
KRH38185	Soybean	cytosol, nucleus	21.99	37.59
TraesCS1A01G251500.1	Wheat	mitochondrion, nucleus, plastid	41.08	36.26
Zm00001d021350_P003	Maize	plastid	38.59	36.05
HORVU1Hr1G061530.1	Barley	plastid	39.83	35.04
CDY06058	Canola	plastid	36.93	34.63
AT3G58020.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	36.1	34.25
KXG36196	Sorghum	plastid	36.51	34.24
CDX71980	Canola	plastid	29.88	31.86
Bra007374.1-P	Field mustard	cytosol	23.24	31.82
KRH53847	Soybean	nucleus	24.9	29.56
AT2G42065.1	Thale cress	plastid	24.9	28.57
KRH38183	Soybean	extracellular, plasma membrane	26.97	22.26
CDY14812	Canola	mitochondrion, nucleus, plastid	43.15	18.31
KRH64103	Soybean	mitochondrion	21.58	17.45
Bra016896.1-P	Field mustard	mitochondrion, nucleus, plastid	23.24	10.79

Protein Annotations

EMBL:ACUP02001091	EnsemblPlants:KRH71846	EnsemblPlantsGene:GLYMA_02G172700	EntrezGene:100812123	Gene3D:1.10.287.110	InterPro:DnaJ_domain
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ProteinID:KRH71846	ProteinID:KRH71846.1	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000233713A
UniProt:I1JG10	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:27419070..27424482

Molecular Weight (calculated)

28163.7 Da

IEP (calculated)

9.709

GRAVY (calculated)

-1.022

Length

241 amino acids

Sequence
(BLAST)

001: MNKAIFTRFF HSTPLLERKS RTFGESRCNN YSKRFRKLRA KQTLLHDVNA YAQFMCQSWK EDVDEDGPSP SLGPSWFRKQ YSPKGSGRHR NDNQRSKHQF
101: RRNHEFCKDD FDVETVFRSA FGGNRSFYWS FINEENPQWR KSGGFSNHGK SWNWRRWSEN GYNGTSTESD CSQSDLISDR LALGMSASGP LKLEDVKNAY
201: RICALKWHPD RHDGSFKVIA EEKFKHCSAA YQSLCDKLAL D

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.