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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • plastid 3
  • extracellular 1
  • mitochondrion 4
  • golgi 1
  • nucleus 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus, plastid
Any Predictor:extracellular, golgi, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:extracellular
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:golgi, nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06886 Canola mitochondrion, nucleus, plastid 29.09 58.98
CDY14812 Canola mitochondrion, nucleus, plastid 57.61 52.64
Bra004669.1-P Field mustard mitochondrion, nucleus, plastid 23.51 46.56
AT2G42080.1 Thale cress mitochondrion, nucleus, plastid 22.93 45.25
KRG95387 Soybean plastid 11.95 24.41
KRH71846 Soybean mitochondrion 10.79 23.24
VIT_08s0007g06530.t01 Wine grape plastid 11.56 22.99
TraesCS1B01G262100.2 Wheat mitochondrion, nucleus, plastid 9.06 18.22
TraesCS1D01G251000.1 Wheat mitochondrion 9.06 18.22
KXG36196 Sorghum plastid 8.67 17.51
TraesCS1A01G251500.1 Wheat mitochondrion, nucleus, plastid 9.06 17.22
Solyc03g063350.2.1 Tomato cytosol 6.17 17.02
Os07t0470800-00 Rice mitochondrion 8.29 16.93
HORVU1Hr1G061530.1 Barley plastid 8.86 16.79
GSMUA_Achr11P... Banana nucleus 6.74 16.75
Zm00001d021350_P003 Maize plastid 8.29 16.67
KRH38097 Soybean cytosol 5.59 15.68
Bra007374.1-P Field mustard cytosol 1.54 4.55
Protein Annotations
EnsemblPlants:Bra016896.1EnsemblPlants:Bra016896.1-PEnsemblPlantsGene:Bra016896Gene3D:1.10.287.110InterPro:DnaJ_domainInterPro:IPR001623
InterPro:IPR036869InterPro:J_dom_sfncoils:CoilPFAM:PF00226PFscan:PS50076SEG:seg
SMART:SM00271SUPFAM:SSF46565UniParc:UPI00025438D2UniProt:M4DK68MapMan:35.2:
Description
AT2G42080 (E=6e-080) | DNAJ heat shock N-terminal domain-containing protein
Coordinates
chrA04:-:17711811..17716536
Molecular Weight (calculated)
60994.0 Da
IEP (calculated)
7.778
GRAVY (calculated)
-1.235
Length
519 amino acids
Sequence
(BLAST)
001: MNAAVRAAIL RTQSVSSHLK ASFFHSTPVL ERKRRTSWDS KSNVHRKRFR RMREKQELLR NVNAFASNMF TSWHDEFDYK EPPSSQKRTS WFKKQYAKEP
101: KGKWNGKHGP RNFDFCEVDE DFDIDYIFPG GPRGFSFSFT FEDDEPPRWH QRNHSSSRSK HHRIYEDEDD DYTTSTESSD SESESEPNQA SHRQALGLSP
201: SGPLNLKDVK HAYRVCALKW HPDRHQGSTK AAAKKAKEAK ENMNKCNQDS KSPRKSQFGY ADKDFDIIFR SLFGVPRGFD YSIYEEEDRR WWYHPSWFSG
301: SSSNSWRSKY RFYDKDEEQE EEEELSEEEE EESNSSSNWW RSKSRFDEKE KKEKDGYGSS KSSGSVLSDP IEATHRETLG LSPWAPLKLE DVKHAYRTCA
401: LKWHPDLHDD STKKSNVKKL LREHQEKVHR AVEELRRERE ERSNFQFGSV LSDPIEASHR ETLGLSPWAP LKLEDVKHAY RACALKWYPD HHDDSTKAEA
501: EAKFKFCNVA YESLIKKLQ
Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)
001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.