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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • plastid 5
  • cytosol 1
  • mitochondrion 2
  • golgi 1
  • nucleus 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus, plastid
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:golgi, nucleus
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65802 Canola mitochondrion, nucleus, plastid 88.93 85.98
AT2G42080.1 Thale cress mitochondrion, nucleus, plastid 72.14 71.86
KRH71846 Soybean mitochondrion 42.37 46.06
VIT_08s0007g06530.t01 Wine grape plastid 45.42 45.59
KRG95387 Soybean plastid 43.51 44.88
KRH38097 Soybean cytosol 28.24 40.0
Solyc03g063350.2.1 Tomato cytosol 28.63 39.89
GSMUA_Achr11P... Banana nucleus 30.92 38.76
Os07t0470800-00 Rice mitochondrion 35.5 36.61
TraesCS1B01G262100.2 Wheat mitochondrion, nucleus, plastid 35.88 36.43
TraesCS1D01G251000.1 Wheat mitochondrion 35.11 35.66
Zm00001d021350_P003 Maize plastid 33.97 34.5
TraesCS1A01G251500.1 Wheat mitochondrion, nucleus, plastid 35.88 34.43
HORVU1Hr1G061530.1 Barley plastid 35.88 34.31
KXG36196 Sorghum plastid 33.59 34.24
Bra007374.1-P Field mustard cytosol 22.14 32.95
Bra016896.1-P Field mustard mitochondrion, nucleus, plastid 46.56 23.51
Protein Annotations
EnsemblPlants:Bra004669.1EnsemblPlants:Bra004669.1-PEnsemblPlantsGene:Bra004669Gene3D:1.10.287.110InterPro:DnaJ_domainInterPro:IPR001623
InterPro:IPR036869InterPro:J_dom_sfPANTHER:PTHR45376PFAM:PF00226PFscan:PS50076SEG:seg
SMART:SM00271SUPFAM:SSF46565UniParc:UPI000254788EUniProt:M4CKD4MapMan:35.2:
Description
AT2G42080 (E=8e-077) | DNAJ heat shock N-terminal domain-containing protein
Coordinates
chrA05:-:1307861..1309507
Molecular Weight (calculated)
30665.3 Da
IEP (calculated)
9.448
GRAVY (calculated)
-1.221
Length
262 amino acids
Sequence
(BLAST)
001: MNAAIRAAIQ RPQSLASHLK TALFHSTPVL ERKRRTSWES RSYVHKKRNR RMREKQELLR NVNAFAANMF PSWHDDGYDD DDEPSSRKQK SWYKKKYAKK
101: ETKGKWDPRN FDFCEADDDF DIDYVFRTAF GGPRGFSFSF TFEEDEPPRW HHRDHSSRFS NNSKKKSWRS KHRIYEEEEE DGYTSTESSD SESEPNQASH
201: RQALGLSPSG PLNLKDVKNA FRTCALKWHP DRHQGSSKEA AEAKFKLCSV AYESLCEKLA VN
Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)
001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.