Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79893 | Canola | mitochondrion, nucleus, plastid | 72.62 | 73.75 |
| CDY06886 | Canola | mitochondrion, nucleus, plastid | 70.72 | 72.66 |
| Bra004669.1-P | Field mustard | mitochondrion, nucleus, plastid | 71.86 | 72.14 |
| CDY65802 | Canola | mitochondrion, nucleus, plastid | 72.62 | 70.48 |
| AT3G58020.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 50.95 | 52.76 |
| KRH71846 | Soybean | mitochondrion | 42.97 | 46.89 |
| KRG95387 | Soybean | plastid | 44.11 | 45.67 |
| VIT_08s0007g06530.t01 | Wine grape | plastid | 44.49 | 44.83 |
| AT2G42065.1 | Thale cress | plastid | 35.36 | 44.29 |
| Solyc03g063350.2.1 | Tomato | cytosol | 30.04 | 42.02 |
| KRH38097 | Soybean | cytosol | 27.38 | 38.92 |
| GSMUA_Achr11P... | Banana | nucleus | 30.8 | 38.76 |
| Os07t0470800-00 | Rice | mitochondrion | 36.12 | 37.4 |
| TraesCS1B01G262100.2 | Wheat | mitochondrion, nucleus, plastid | 36.12 | 36.82 |
| TraesCS1D01G251000.1 | Wheat | mitochondrion | 35.36 | 36.05 |
| TraesCS1A01G251500.1 | Wheat | mitochondrion, nucleus, plastid | 36.12 | 34.8 |
| KXG36196 | Sorghum | plastid | 33.84 | 34.63 |
| Zm00001d021350_P003 | Maize | plastid | 33.84 | 34.5 |
| HORVU1Hr1G061530.1 | Barley | plastid | 35.36 | 33.94 |
| CDY14812 | Canola | mitochondrion, nucleus, plastid | 69.96 | 32.39 |
| Bra016896.1-P | Field mustard | mitochondrion, nucleus, plastid | 45.25 | 22.93 |
| AT2G18465.1 | Thale cress | mitochondrion, nucleus, plastid | 21.29 | 20.9 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:818808 | ProteinID:AAB63536.1 | ProteinID:AEC10068.1 | ArrayExpress:AT2G42080 |
| EnsemblPlantsGene:AT2G42080 | RefSeq:AT2G42080 | TAIR:AT2G42080 | RefSeq:AT2G42080-TAIR-G | EnsemblPlants:AT2G42080.1 | TAIR:AT2G42080.1 |
| EMBL:AY136439 | EMBL:BT002128 | InterPro:DnaJ_domain | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 |
| GO:GO:0009644 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0042538 | GO:GO:0051510 | GO:GO:1903578 | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_181738.1 | UniProt:P93739 | PFAM:PF00226 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50076 | PANTHER:PTHR45376 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI00000ABFDC | SEG:seg | : | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
Coordinates
chr2:-:17553204..17555673
Molecular Weight (calculated)
30840.4 Da
IEP (calculated)
9.296
GRAVY (calculated)
-1.190
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.