Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71980 | Canola | plastid | 56.3 | 63.27 |
| CDY06058 | Canola | plastid | 61.02 | 60.31 |
| AT2G42080.1 | Thale cress | mitochondrion, nucleus, plastid | 52.76 | 50.95 |
| AT2G42065.1 | Thale cress | plastid | 32.68 | 39.52 |
| VIT_08s0007g06530.t01 | Wine grape | plastid | 40.16 | 39.08 |
| KRG95387 | Soybean | plastid | 36.61 | 36.61 |
| KRH71846 | Soybean | mitochondrion | 34.25 | 36.1 |
| Solyc03g063350.2.1 | Tomato | cytosol | 26.38 | 35.64 |
| KRH38097 | Soybean | cytosol | 24.41 | 33.51 |
| GSMUA_Achr11P... | Banana | nucleus | 27.56 | 33.49 |
| TraesCS1B01G262100.2 | Wheat | mitochondrion, nucleus, plastid | 33.46 | 32.95 |
| Os07t0470800-00 | Rice | mitochondrion | 32.68 | 32.68 |
| TraesCS1D01G251000.1 | Wheat | mitochondrion | 32.68 | 32.17 |
| Zm00001d021350_P003 | Maize | plastid | 32.68 | 32.17 |
| KXG36196 | Sorghum | plastid | 32.28 | 31.91 |
| TraesCS1A01G251500.1 | Wheat | mitochondrion, nucleus, plastid | 33.46 | 31.14 |
| HORVU1Hr1G061530.1 | Barley | plastid | 33.46 | 31.02 |
| AT2G18465.1 | Thale cress | mitochondrion, nucleus, plastid | 21.26 | 20.15 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:824971 | ProteinID:AEE79730.1 | ArrayExpress:AT3G58020 | EnsemblPlantsGene:AT3G58020 |
| RefSeq:AT3G58020 | TAIR:AT3G58020 | RefSeq:AT3G58020-TAIR-G | EnsemblPlants:AT3G58020.1 | TAIR:AT3G58020.1 | EMBL:AY080851 |
| Unigene:At.34774 | InterPro:DnaJ_domain | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_191361.2 |
| PFAM:PF00226 | PO:PO:0000293 | PFscan:PS50076 | PANTHER:PTHR45376 | UniProt:Q8RXJ5 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI000009DE61 | SEG:seg | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXJ5]
Coordinates
chr3:+:21479380..21481349
Molecular Weight (calculated)
29568.3 Da
IEP (calculated)
9.627
GRAVY (calculated)
-1.068
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAAIRAAIL KPQDYYSHLK TALFHSTPIL QRKHQSNSKA RSKRFGRKKA KQDLRRNVNA FAQHLFGIWS DGFDYSGKHT SWFEKQYSRV SKRNRNGKTH
101: IPQHLDKRCF DFSEVDEGYQ IEYFLKTALG GSRGFSWSNT REGGTRSGRY SNNFRKSWGS RYRLDEEEEE EEEEYEYSST GVSDTEPNQE SHRQTLGLSS
201: SGPLNLEDVK IAYRACALKW HPDRHHTSTK NEAEEKFKLC TVAYQSLCEK LAMN
101: IPQHLDKRCF DFSEVDEGYQ IEYFLKTALG GSRGFSWSNT REGGTRSGRY SNNFRKSWGS RYRLDEEEEE EEEEYEYSST GVSDTEPNQE SHRQTLGLSS
201: SGPLNLEDVK IAYRACALKW HPDRHHTSTK NEAEEKFKLC TVAYQSLCEK LAMN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.