CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, vacuole

Predictor Summary:

nucleus 1
mitochondrion 3
extracellular 1
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38185	Soybean	cytosol, nucleus	55.71	27.66
KRH38097	Soybean	cytosol	67.14	25.41
KRG95387	Soybean	plastid	80.0	22.05
KRH71846	Soybean	mitochondrion	74.29	21.58
KRH53847	Soybean	nucleus	54.29	18.72
KRH38183	Soybean	extracellular, plasma membrane	55.71	13.36
KRH64103	Soybean	mitochondrion	40.0	9.4

Protein Annotations

EMBL:ACUP02002025	EnsemblPlants:KRH67071	EnsemblPlantsGene:GLYMA_03G144900	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45376	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ProteinID:KRH67071	ProteinID:KRH67071.1	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0006EDAC11	UniProt:A0A0R0KUM1
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:36047285..36050546

Molecular Weight (calculated)

7753.4 Da

IEP (calculated)

7.290

GRAVY (calculated)

-0.181

Length

70 amino acids

Sequence
(BLAST)

1: MIMQNPCFRL ALGLSVSGPL KLEDVKNAYR PCALKWHPDR HQGSSKAVAE EKFELCSAAY QSLCDSLALD

Best Arabidopsis Sequence Match ( AT2G42080.1 )
(BLAST)

001: MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK
101: GNQNNKHGPY TWGKRNFDFC EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE EEEDYTSDSS DSESEPNQVS
201: HRQALGLSPS GPLNLKDVKH AYRTCALKWH PDRHQGSTKE AAEAKFKLCS VAYQSLCEKL SVN

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:P93739]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.