Factsheet for PGSC0003DMT400037270

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037270
PGSC0003DMT400057095
PGSC0003DMT400059624

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55920.1	PGSC0003DMT400037270	AT1G55920.1	9076992
AT1G55920.1	PGSC0003DMT400057095	AT1G55920.1	9076992
AT3G13110.1	PGSC0003DMT400037270	AT3G13110.1	11168407
AT3G13110.1	PGSC0003DMT400057095	AT3G13110.1	11168407
AT3G13110.1	PGSC0003DMT400059624	AT3G59760.1	11168407
AT3G13110.1	PGSC0003DMT400059624	AT3G59760.1	12063244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g006040.1.1	Tomato	extracellular	97.81	97.81
PGSC0003DMT400057095	Potato	cytosol	67.12	74.02
CDY52913	Canola	cytosol	49.86	68.68
AT1G55920.1	Thale cress	cytosol	55.62	64.65
Bra038031.1-P	Field mustard	cytosol	51.51	63.51
CDY53752	Canola	cytosol	53.15	62.99
CDY42400	Canola	cytosol	55.07	62.42
Bra030821.1-P	Field mustard	cytosol	55.07	62.42
CDY08269	Canola	cytosol	53.7	62.22
CDY10517	Canola	cytosol	54.79	61.92
Bra037094.1-P	Field mustard	cytosol	53.15	61.59
KRH00049	Soybean	mitochondrion	28.77	61.4
CDY26079	Canola	cytosol	53.7	61.25
VIT_19s0015g00130.t01	Wine grape	mitochondrion	63.01	61.01
CDX84336	Canola	cytosol	52.05	60.32
GSMUA_Achr6P24840_001	Banana	cytosol	26.58	59.15
GSMUA_AchrUn_...	Banana	cytosol	38.08	56.73
KRH46343	Soybean	mitochondrion	59.73	56.33
PGSC0003DMT400000764	Potato	cytosol	45.21	56.31
KRH05125	Soybean	mitochondrion	24.11	56.05
KRH73892	Soybean	mitochondrion	53.7	55.06
KRG98542	Soybean	mitochondrion	58.63	54.73
KRH14245	Soybean	mitochondrion	51.23	53.28
AT3G13110.1	Thale cress	mitochondrion, plastid	56.16	52.43
TraesCS4B01G263300.1	Wheat	mitochondrion	44.11	52.1
Bra034705.1-P	Field mustard	plastid	55.89	51.91
HORVU4Hr1G071040.1	Barley	cytosol, mitochondrion	44.11	51.27
TraesCS4A01G042700.1	Wheat	cytosol, mitochondrion	43.84	50.96
TraesCS4D01G263500.1	Wheat	cytosol, mitochondrion	43.56	50.64
EER92698	Sorghum	cytosol	42.19	49.52
Zm00001d028154_P001	Maize	cytosol	41.92	48.73
Os03t0196600-01	Rice	cytosol, plasma membrane	41.1	47.62
Os03t0185000-00	Rice	cytosol, plasma membrane	38.9	47.18
PGSC0003DMT400003992	Potato	cytosol	36.99	37.71

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	EntrezGene:102605877	Gene3D:2.160.10.10	MapMan:4.1.4.2.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	InterPro:Hexapep	InterPro:Hexapep_transf_CS	UniProt:M1B536	PFAM:PF00132	PFAM:PF06426
EnsemblPlantsGene:PGSC0003DMG400014379	PGSC:PGSC0003DMG400014379	EnsemblPlants:PGSC0003DMT400037270	ScanProsite:PS00101	PANTHER:PTHR42811	PANTHER:PTHR42811:SF2
SMART:SM00971	SUPFAM:SSF51161	InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172	InterPro:Trimer_LpxA-like_sf
UniParc:UPI0002950EF9	RefSeq:XP_015166455.1	SEG:seg	:	:	:

Description

Serine acetyltransferase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400014379]

Coordinates

chr10:+:1037936..1039899

Molecular Weight (calculated)

40234.4 Da

IEP (calculated)

6.977

GRAVY (calculated)

-0.116

Length

365 amino acids

Sequence
(BLAST)

001: MSTNLLGSPF LLKNVLTTSP YNNNKLSIFT IKACLHSSRT KTPNPNKSQI DDHVYNYTKY CTPNFPDHVS QTPISEKELK NTKNGGILDD FEKKGVLDLW
101: FKMQDEARFD VEQEPILENY YKNSILVQDC MESALAYHLS LKLSNSSLRS DALFELFMGV FIEDQELIFD VTDDLRAVKE RDPACVSYVH CFLNFKGFLA
201: CQAHRIAHRL WSKGRKIVSL VMQNRVCEVF AVDIHPGAKI GSGILLDHAT GVVIGETAVI GNNVSILHNV TLGGTGKVCG DRHPKIGDGV LIGAGTCVLG
301: NVRIEDGAKI GAGSVVLMEV PARTTAVGNP ARLIGGKENP IKLDKIPSLT MDHTSHMSDW SDYVI

Best Arabidopsis Sequence Match ( AT3G13110.1 )
(BLAST)

001: MLPVTSRRHF TMSLYMLRSS SPHINHHSFL LPSFVSSKFK HHTLSPPPSP PPPPPMAACI DTCRTGKPQI SPRDSSKHHD DESGFRYMNY FRYPDRSSFN
101: GTQTKTLHTR PLLEDLDRDA EVDDVWAKIR EEAKSDIAKE PIVSAYYHAS IVSQRSLEAA LANTLSVKLS NLNLPSNTLF DLFSGVLQGN PDIVESVKLD
201: LLAVKERDPA CISYVHCFLH FKGFLACQAH RIAHELWTQD RKILALLIQN RVSEAFAVDF HPGAKIGTGI LLDHATAIVI GETAVVGNNV SILHNVTLGG
301: TGKQCGDRHP KIGDGVLIGA GTCILGNITI GEGAKIGAGS VVLKDVPPRT TAVGNPARLL GGKDNPKTHD KIPGLTMDQT SHISEWSDYV I

Arabidopsis Description

SAT3Serine acetyltransferase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39218]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.