Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400011385 | |
| PGSC0003DMT400020677 | |
| PGSC0003DMT400039921 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26570.1 | PGSC0003DMT400011385 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | PGSC0003DMT400020677 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | PGSC0003DMT400039921 | AT2G26570.1 | 20974974 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g078950.1.1 | Tomato | nucleus | 30.21 | 96.07 |
| Bra034308.1-P | Field mustard | nucleus | 40.0 | 59.97 |
| PGSC0003DMT400039921 | Potato | nucleus | 49.48 | 56.07 |
| PGSC0003DMT400011385 | Potato | nucleus | 51.24 | 55.04 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 47.63 | 54.74 |
| CDY48180 | Canola | nucleus | 41.03 | 53.93 |
| CDX77048 | Canola | nucleus | 41.96 | 53.76 |
| AT2G26570.1 | Thale cress | nucleus | 43.92 | 52.79 |
| AT4G33390.1 | Thale cress | nucleus | 40.31 | 50.19 |
| Bra041137.1-P | Field mustard | nucleus | 28.76 | 49.73 |
| CDX72400 | Canola | nucleus | 34.85 | 49.71 |
| CDY46119 | Canola | nucleus | 34.74 | 49.63 |
| KRH07566 | Soybean | nucleus | 30.62 | 48.29 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 38.25 | 46.03 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 34.02 | 46.03 |
| KRH51982 | Soybean | nucleus | 44.64 | 45.44 |
| KRH45361 | Soybean | nucleus | 27.22 | 45.05 |
| KRH61284 | Soybean | nucleus | 44.85 | 44.71 |
| CDY22380 | Canola | nucleus | 32.89 | 44.37 |
| CDX71526 | Canola | nucleus | 32.99 | 44.2 |
| Bra033647.1-P | Field mustard | nucleus | 32.68 | 43.97 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 35.57 | 43.51 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 35.36 | 43.25 |
| Os03t0395300-01 | Rice | plasma membrane | 34.43 | 43.04 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 37.11 | 42.81 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 34.23 | 42.56 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 38.45 | 42.53 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 35.88 | 42.44 |
| CDY62582 | Canola | nucleus | 31.86 | 42.21 |
| KRH15355 | Soybean | nucleus | 43.92 | 42.18 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 33.2 | 42.15 |
| Zm00001d029420_P002 | Maize | nucleus | 34.02 | 42.09 |
| Bra040259.1-P | Field mustard | nucleus | 31.75 | 42.08 |
| CDY17054 | Canola | nucleus | 30.62 | 41.83 |
| CDY17108 | Canola | nucleus | 31.44 | 41.72 |
| AT5G42880.1 | Thale cress | nucleus | 32.16 | 41.54 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 35.15 | 41.48 |
| CDY43212 | Canola | nucleus | 30.52 | 41.46 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 35.88 | 41.38 |
| Zm00001d022161_P001 | Maize | nucleus | 34.12 | 41.38 |
| EER92167 | Sorghum | nucleus | 33.4 | 41.33 |
| Zm00001d047240_P002 | Maize | nucleus | 33.4 | 41.27 |
| AT1G45545.2 | Thale cress | nucleus | 31.96 | 41.17 |
| Bra014049.1-P | Field mustard | nucleus | 31.96 | 41.11 |
| GSMUA_Achr10P... | Banana | cytosol | 34.43 | 40.98 |
| KXG36701 | Sorghum | nucleus | 34.33 | 40.36 |
| Os07t0619100-01 | Rice | plasma membrane | 33.4 | 39.66 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 25.36 | 39.17 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 35.26 | 37.83 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 19.69 | 37.75 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 29.07 | 32.6 |
| PGSC0003DMT400050839 | Potato | nucleus | 15.57 | 24.32 |
| PGSC0003DMT400057359 | Potato | nucleus | 16.91 | 24.3 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 11.03 | 23.73 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400020677 | EnsemblPlantsGene:PGSC0003DMG400008014 | EntrezGene:102599514 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF2 | PFAM:PF05701 | PGSC:PGSC0003DMG400008014 | RefSeq:XP_006354890.1 | SEG:seg | UniParc:UPI000296E355 |
| UniProt:M1ADX7 | MapMan:20.5.8.1 | : | : | : | : |
Description
Paramyosin [Source:PGSC_GENE;Acc:PGSC0003DMG400008014]
Coordinates
chr4:-:68269026..68276002
Molecular Weight (calculated)
106159.0 Da
IEP (calculated)
4.915
GRAVY (calculated)
-0.808
Length
970 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDAKDMKEN APPEPSHEPK VSSPNDDQSH SAAQTSQHTS EIEISKIQET AVDASEHLKE ASHSLLQESQ TPAGGNLISA APIKSDGMST ISETGISQMV
101: SGTPMVEPEA SPQLAHDLKT DPSAHSIATA LSESNSSSTL DAKPSEILEP ALDMGANVKV QNQPNDSSEG PTAEKDASSA LTGSTLKEEN RKESSEYVQS
201: NHSEVAKASS EHVQSNHSEV AKESSEHVQS NHSEVEPNNA SLFHQPDNSS SSTHIDADDS SPLSTQVMRK PENNHHLPTP DNIVRPLAKS STFSARASIR
301: TASPKHPEKS DINKGHIDTA APIESVKQAV SKFGGIVDWK AHRVQTVERR QLVEQELSKV QEEIPFYKKQ SQAAEDAKVL VLKELDGTKR LIEELKLNLE
401: RAQKEEQQAK QDSELAKLRV EEMEQGIGND LSIAAKAQLE VARARHAAAV SELKTVKSEL EDLRKDYALL VSDKDGAVKR AEEAVSASKE VEKTLETLTI
501: ELITAKESLE VAHAAHLEAE EHRIGAAMAG EQDALNWEKE LKQAEEELVR LNQQILSAKD LRGKLDTASV LLLDLKTELA AYMESKLKQE TDEGNLNGEQ
601: SEPEKRTHDE IQSVVTTAKR ELEEVKLNIE KATTEVNFLK VAATSLKAEL EKEKSELAAI QQREGMASVA AASLEAELSR TQSEIVLAQK KEKEAREKMV
701: ELPKQLHEAS QEADRANSLA QMARDDLNKA KEEAEEAKAG ASTVESRLLA VKKEIEAAKA AEKLALAAIA ALEESESTQK TKDEETPPGV TLSLEEYYEL
801: SKQAHEAEEQ ANKKVADAHT QIDVAKESEL RSLNRLDEVN REITERKEAL GVALQKAEKA KEGKLSVEQE LRKWREEQEQ RRKAGVSIPP TAGSPRKSDE
901: ENNESKTSES APEATASYDS TSPKAQLQAS STEADSSPDV KVPRKKKRSF FPRIFMFLGR RKAAQAKSAQ
101: SGTPMVEPEA SPQLAHDLKT DPSAHSIATA LSESNSSSTL DAKPSEILEP ALDMGANVKV QNQPNDSSEG PTAEKDASSA LTGSTLKEEN RKESSEYVQS
201: NHSEVAKASS EHVQSNHSEV AKESSEHVQS NHSEVEPNNA SLFHQPDNSS SSTHIDADDS SPLSTQVMRK PENNHHLPTP DNIVRPLAKS STFSARASIR
301: TASPKHPEKS DINKGHIDTA APIESVKQAV SKFGGIVDWK AHRVQTVERR QLVEQELSKV QEEIPFYKKQ SQAAEDAKVL VLKELDGTKR LIEELKLNLE
401: RAQKEEQQAK QDSELAKLRV EEMEQGIGND LSIAAKAQLE VARARHAAAV SELKTVKSEL EDLRKDYALL VSDKDGAVKR AEEAVSASKE VEKTLETLTI
501: ELITAKESLE VAHAAHLEAE EHRIGAAMAG EQDALNWEKE LKQAEEELVR LNQQILSAKD LRGKLDTASV LLLDLKTELA AYMESKLKQE TDEGNLNGEQ
601: SEPEKRTHDE IQSVVTTAKR ELEEVKLNIE KATTEVNFLK VAATSLKAEL EKEKSELAAI QQREGMASVA AASLEAELSR TQSEIVLAQK KEKEAREKMV
701: ELPKQLHEAS QEADRANSLA QMARDDLNKA KEEAEEAKAG ASTVESRLLA VKKEIEAAKA AEKLALAAIA ALEESESTQK TKDEETPPGV TLSLEEYYEL
801: SKQAHEAEEQ ANKKVADAHT QIDVAKESEL RSLNRLDEVN REITERKEAL GVALQKAEKA KEGKLSVEQE LRKWREEQEQ RRKAGVSIPP TAGSPRKSDE
901: ENNESKTSES APEATASYDS TSPKAQLQAS STEADSSPDV KVPRKKKRSF FPRIFMFLGR RKAAQAKSAQ
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Arabidopsis Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.