Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22380 | Canola | nucleus | 82.6 | 83.17 |
| AT5G42880.1 | Thale cress | nucleus | 68.92 | 66.44 |
| CDY43212 | Canola | nucleus | 50.69 | 51.4 |
| CDY17054 | Canola | nucleus | 49.31 | 50.28 |
| CDY62582 | Canola | nucleus | 50.83 | 50.27 |
| Solyc05g042150.1.1 | Tomato | cytosol | 13.12 | 49.48 |
| CDY17108 | Canola | nucleus | 49.45 | 48.97 |
| Solyc07g026880.1.1 | Tomato | cytosol | 10.36 | 48.7 |
| CDX77048 | Canola | nucleus | 45.99 | 43.99 |
| CDY48180 | Canola | nucleus | 43.92 | 43.09 |
| CDY46119 | Canola | nucleus | 39.92 | 42.56 |
| Solyc04g078950.1.1 | Tomato | nucleus | 17.27 | 40.98 |
| CDX72400 | Canola | nucleus | 37.98 | 40.44 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 43.92 | 39.45 |
| KRH07566 | Soybean | nucleus | 33.29 | 39.19 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 45.03 | 38.63 |
| Solyc07g022910.2.1 | Tomato | plastid | 45.03 | 38.49 |
| KRH45361 | Soybean | nucleus | 30.8 | 38.05 |
| PGSC0003DMT400011385 | Potato | nucleus | 46.13 | 36.99 |
| Solyc12g088830.1.1 | Tomato | nucleus | 42.82 | 36.77 |
| PGSC0003DMT400039921 | Potato | nucleus | 43.37 | 36.68 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 35.08 | 35.43 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 42.27 | 34.89 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 37.02 | 33.8 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 36.74 | 33.54 |
| Os03t0395300-01 | Rice | plasma membrane | 35.91 | 33.51 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 37.71 | 33.29 |
| GSMUA_Achr10P... | Banana | cytosol | 37.43 | 33.25 |
| Solyc08g015840.1.1 | Tomato | cytosol | 8.98 | 33.16 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 34.94 | 33.12 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 38.4 | 33.06 |
| PGSC0003DMT400020677 | Potato | nucleus | 44.2 | 32.99 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 37.85 | 32.58 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 34.94 | 32.44 |
| KRH51982 | Soybean | nucleus | 42.54 | 32.32 |
| Zm00001d047240_P002 | Maize | nucleus | 34.81 | 32.1 |
| KRH61284 | Soybean | nucleus | 43.09 | 32.07 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 36.33 | 32.0 |
| Zm00001d022161_P001 | Maize | nucleus | 35.08 | 31.75 |
| KXG36701 | Sorghum | nucleus | 36.05 | 31.64 |
| Zm00001d029420_P002 | Maize | nucleus | 34.25 | 31.63 |
| Os07t0619100-01 | Rice | plasma membrane | 35.64 | 31.58 |
| KRH15355 | Soybean | nucleus | 43.92 | 31.49 |
| EER92167 | Sorghum | nucleus | 33.84 | 31.25 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 26.93 | 31.05 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 36.33 | 29.09 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 20.17 | 28.85 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 31.35 | 26.24 |
| CDY42964 | Canola | cytosol | 16.16 | 22.5 |
| CDY21038 | Canola | cytosol | 16.99 | 22.49 |
| CDY35594 | Canola | nucleus | 15.88 | 21.99 |
| CDY28631 | Canola | nucleus | 19.61 | 21.78 |
| CDY11973 | Canola | nucleus | 19.34 | 21.77 |
| CDY17364 | Canola | nucleus | 19.48 | 21.59 |
| CDY58167 | Canola | cytosol | 15.47 | 21.54 |
| CDY31245 | Canola | cytosol | 16.3 | 21.53 |
| CDX90485 | Canola | cytosol | 15.75 | 21.51 |
| CDY50127 | Canola | cytosol | 15.47 | 21.41 |
| CDY36768 | Canola | nucleus | 18.92 | 21.24 |
| CDY09639 | Canola | cytosol | 15.47 | 21.09 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 7.73 | 19.31 |
| CDY15972 | Canola | cytosol | 17.82 | 14.38 |
| CDY26542 | Canola | cytosol | 18.37 | 13.18 |
| CDY35593 | Canola | cytosol | 5.66 | 12.17 |
Protein Annotations
| EnsemblPlants:CDX71526 | EnsemblPlantsGene:GSBRNA2T00148474001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | ProteinID:CDX71526 | ProteinID:CDX71526.1 | SEG:seg | UniParc:UPI0004EE299A | MapMan:35.1 |
Description
BnaC04g17610D
Coordinates
chrLK031793:+:2247444..2249710
Molecular Weight (calculated)
81626.7 Da
IEP (calculated)
4.515
GRAVY (calculated)
-0.793
Length
724 amino acids
Sequence
(BLAST)
(BLAST)
001: MSADDDKDSD DLNIFLNAIG EEPEDEAPMR KSTNDDIFFN LDDGGGGDLH NPFQDFADSN QPVFESPKVY VAPRVMISHQ DSFSEEDSRI EDARILPFSP
101: RLRVPASPRA FVYQRSVESP RFGSPVGLID TASPFESVKD AVSKFGGITD WKAHKIQTIE RRKMVDEELE KIQEALPEYK RESELAAEAK YDALKELETT
201: KGLIEELKLE LEKAELEEQQ AKQDSELAQM RVEEMEKGVA NEASVAVKAQ LEVAKARQES ATCELRSVRE EIEMVCNEYE DMLREKDLAA ERAEAAVKEA
301: KEIEREMDGL SIELIATKES LESAHTAHLE AEEKKFGAAM GRDQDMYNWE KELKMVEDDI ERLNQEIRAA DDMKTRLEAA SALEYDLGAE LAAFTESSTS
401: KLLMGNDNIH AAVDSAKREL EEVKSNIEKA ASEVKALTII AGSLQSELAR ERQDLAETKE RQSAGFVRTS DEEARQELMD TSNKLEEAMK EAEDAKLLAA
501: AARDELRMAE ELFEQAKTGM STIESRLTEA KKEMEAARAS EKLALAAIKA LQETESSQRF EEMSNSPRSI IISVEEYYEL SKKAHELEEE ANTKLSQIVS
601: QIEVAKEEES RILEKLEEVN REMSVRKGEL KAAMGKAEKA RDGKLSMEQE LRKWRSENGK RRTEEGTEPE KSPTRSSTFA FGEQGTSNNI DTNNVTPETK
701: KKKKKKLSLL PKVLMFLSRK KSHK
101: RLRVPASPRA FVYQRSVESP RFGSPVGLID TASPFESVKD AVSKFGGITD WKAHKIQTIE RRKMVDEELE KIQEALPEYK RESELAAEAK YDALKELETT
201: KGLIEELKLE LEKAELEEQQ AKQDSELAQM RVEEMEKGVA NEASVAVKAQ LEVAKARQES ATCELRSVRE EIEMVCNEYE DMLREKDLAA ERAEAAVKEA
301: KEIEREMDGL SIELIATKES LESAHTAHLE AEEKKFGAAM GRDQDMYNWE KELKMVEDDI ERLNQEIRAA DDMKTRLEAA SALEYDLGAE LAAFTESSTS
401: KLLMGNDNIH AAVDSAKREL EEVKSNIEKA ASEVKALTII AGSLQSELAR ERQDLAETKE RQSAGFVRTS DEEARQELMD TSNKLEEAMK EAEDAKLLAA
501: AARDELRMAE ELFEQAKTGM STIESRLTEA KKEMEAARAS EKLALAAIKA LQETESSQRF EEMSNSPRSI IISVEEYYEL SKKAHELEEE ANTKLSQIVS
601: QIEVAKEEES RILEKLEEVN REMSVRKGEL KAAMGKAEKA RDGKLSMEQE LRKWRSENGK RRTEEGTEPE KSPTRSSTFA FGEQGTSNNI DTNNVTPETK
701: KKKKKKLSLL PKVLMFLSRK KSHK
001: MLGDDKDSDD LNLFLNAIGE AGDEEGPTSF NDIDFLTFDD EDLHNPFQDC ETSPINEPPK VYVAPRVMIS HQDSFSEDSR TDVIEDARIL PASPRLRVPA
101: SPRAFVYPRS VESPRFGSPR SVESPCFGSP IGVIDTASPF ESVREAVSKF GGITDWKAHK IQTIERRKMV DEELEKIQEA MPEYKREAEL AEEAKYDALE
201: ELENTKGLIE ELKLELEKAE KEEQQAKQDS ELAQMRVEEM EKGVANEASV AVKTQLEVAK ARQVSATSEL RSVREEIEMV SNEYKDMLRE KELAAERADI
301: AVLEAKEIER TMDGLSIELI ATKELLESVH TAHLEAEEKR FSVAMARDQD VYNWEKELKM VENDIERLNQ EVRAADDVKA KLETASALQH DLKTELAAFT
401: DISSGNLLLE KNDIHAAVES ARRELEEVKA NIEKAASEVK KLKIIAGSLQ SELGRERQDL EETKQKESTG LARTNDKDAG EELVETAKKL EQATKEAEDA
501: KALATASRDE LRMAKELSEQ AKRGMSTIES RLVEAKKEME AARASEKLAL AAIKALQETE SSQRFEEINN SPRSIIISVE EYYELSKQAL ESEEEANTRL
601: SEIVSQIEVA KEEESRILEK LEEVNREMSV RKAELKEANG KAEKARDGKL GMEQELRKWR SENGKRRTDE GREPEKSPTR SSTEGRNKEN GFGQSKSFAF
701: GEQGSSSNNT GGSTTTNNNN LTPETKKKKK KLSLFPKVFM FLSRKKSHSH K
101: SPRAFVYPRS VESPRFGSPR SVESPCFGSP IGVIDTASPF ESVREAVSKF GGITDWKAHK IQTIERRKMV DEELEKIQEA MPEYKREAEL AEEAKYDALE
201: ELENTKGLIE ELKLELEKAE KEEQQAKQDS ELAQMRVEEM EKGVANEASV AVKTQLEVAK ARQVSATSEL RSVREEIEMV SNEYKDMLRE KELAAERADI
301: AVLEAKEIER TMDGLSIELI ATKELLESVH TAHLEAEEKR FSVAMARDQD VYNWEKELKM VENDIERLNQ EVRAADDVKA KLETASALQH DLKTELAAFT
401: DISSGNLLLE KNDIHAAVES ARRELEEVKA NIEKAASEVK KLKIIAGSLQ SELGRERQDL EETKQKESTG LARTNDKDAG EELVETAKKL EQATKEAEDA
501: KALATASRDE LRMAKELSEQ AKRGMSTIES RLVEAKKEME AARASEKLAL AAIKALQETE SSQRFEEINN SPRSIIISVE EYYELSKQAL ESEEEANTRL
601: SEIVSQIEVA KEEESRILEK LEEVNREMSV RKAELKEANG KAEKARDGKL GMEQELRKWR SENGKRRTDE GREPEKSPTR SSTEGRNKEN GFGQSKSFAF
701: GEQGSSSNNT GGSTTTNNNN LTPETKKKKK KLSLFPKVFM FLSRKKSHSH K
Arabidopsis Description
WEL3Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.