Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26570.1 | EER92167 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | KXG36701 | AT2G26570.1 | 20974974 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022161_P001 | Maize | nucleus | 71.76 | 74.0 |
| Os07t0619100-01 | Rice | plasma membrane | 57.7 | 58.26 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 55.03 | 57.25 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 54.18 | 56.37 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 55.64 | 54.58 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 55.03 | 53.98 |
| EER92167 | Sorghum | nucleus | 48.36 | 50.89 |
| Solyc05g042150.1.1 | Tomato | cytosol | 11.52 | 49.48 |
| Bra034308.1-P | Field mustard | nucleus | 37.58 | 47.91 |
| Solyc07g026880.1.1 | Tomato | cytosol | 8.73 | 46.75 |
| Solyc04g078950.1.1 | Tomato | nucleus | 16.85 | 45.57 |
| CDY48180 | Canola | nucleus | 39.76 | 44.44 |
| CDX77048 | Canola | nucleus | 39.64 | 43.2 |
| AT2G26570.1 | Thale cress | nucleus | 41.33 | 42.26 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 43.03 | 42.06 |
| AT4G33390.1 | Thale cress | nucleus | 39.39 | 41.72 |
| CDX72400 | Canola | nucleus | 34.06 | 41.32 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 43.64 | 41.05 |
| CDY46119 | Canola | nucleus | 33.7 | 40.94 |
| Bra041137.1-P | Field mustard | nucleus | 27.76 | 40.82 |
| Solyc07g022910.2.1 | Tomato | plastid | 41.82 | 40.73 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 40.36 | 40.61 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 38.3 | 39.21 |
| PGSC0003DMT400039921 | Potato | nucleus | 40.36 | 38.9 |
| KRH07566 | Soybean | nucleus | 28.97 | 38.86 |
| PGSC0003DMT400011385 | Potato | nucleus | 42.3 | 38.65 |
| Solyc12g088830.1.1 | Tomato | nucleus | 39.15 | 38.32 |
| KRH45361 | Soybean | nucleus | 26.79 | 37.71 |
| CDY22380 | Canola | nucleus | 32.48 | 37.27 |
| GSMUA_Achr10P... | Banana | cytosol | 36.73 | 37.18 |
| Bra033647.1-P | Field mustard | nucleus | 32.48 | 37.17 |
| Solyc08g015840.1.1 | Tomato | cytosol | 8.61 | 36.22 |
| CDX71526 | Canola | nucleus | 31.64 | 36.05 |
| AT1G45545.2 | Thale cress | nucleus | 31.88 | 34.93 |
| AT5G42880.1 | Thale cress | nucleus | 31.76 | 34.89 |
| PGSC0003DMT400020677 | Potato | nucleus | 40.36 | 34.33 |
| CDY43212 | Canola | nucleus | 29.45 | 34.03 |
| KRH51982 | Soybean | nucleus | 39.27 | 34.0 |
| KRH61284 | Soybean | nucleus | 40.0 | 33.92 |
| CDY62582 | Canola | nucleus | 30.06 | 33.88 |
| CDY17054 | Canola | nucleus | 29.09 | 33.8 |
| Bra040259.1-P | Field mustard | nucleus | 29.45 | 33.2 |
| CDY17108 | Canola | nucleus | 29.33 | 33.11 |
| Bra014049.1-P | Field mustard | nucleus | 30.18 | 33.02 |
| KRH15355 | Soybean | nucleus | 39.15 | 31.98 |
| OQU93419 | Sorghum | cytosol | 25.09 | 30.35 |
| KXG35766 | Sorghum | nucleus | 29.45 | 30.3 |
| OQU79020 | Sorghum | nucleus | 19.15 | 24.27 |
Protein Annotations
| EnsemblPlants:KXG36701 | EnsemblPlantsGene:SORBI_3002G376600 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF16 |
| PFAM:PF05701 | ProteinID:KXG36701 | ProteinID:KXG36701.1 | SEG:seg | UniParc:UPI0001C80E5A | UniProt:A0A1B6QFJ5 |
| MapMan:20.5.8.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:73378380..73382878
Molecular Weight (calculated)
91597.7 Da
IEP (calculated)
4.844
GRAVY (calculated)
-0.786
Length
825 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTYATEES DSKDSSANKS SSPTGRSEIS VDLPTTPAAK EVPGHSDHEG PSGHEVMSAQ AETENSTLHI VSADSMDSSL QVLEMRLPDL TEDIAESNVP
101: SDTDPEMLSN SGPAEVYISS TNDKADYPSS VDASEVNGGP VNVSNGAGTM LSDEMKAKED ETHHQTDTHT KLKMKQDSET TPESPYRGLI DTAAPFESVR
201: EAVTKFGGIV DWKAHKAQMI ERHKLIQPEL EKIRTEIPLC KEELEAAEAA KSQVVNELEH TKRLIEELKH HLEKVQVEEA QAKQDSELAQ LRAQEIEHGV
301: ADEASAIART QMEVAKERHK KAVAELKSVK EELKSVHEQY AALIDERDTA IKRAEEVISA GKEIEKRVEE LTLELIASKG SLELAHAAHH EAEERRIGAA
401: LAKEQDRIAW EKELHQAQEE LEQLDSNLKF NSDMQLNIDA NLHKLLSLKA ELSAYMVKKL TEEAEGVSKE HESEDSKHIS NSVKEALASK QKELQEVKAD
501: IEKAKAEANV LRFAAMTLRS ELDNEKASLV ALQQGEAMAS VAVSSLEAEL NRTKQEIESV RSKEAEAEEK VVELPMVLQQ ATQEAEEARV AAHLAHEELR
601: KAKEEFEQTK AAAAAAETRL SAVVKEAEAS AASERLAREA VQALQESKEA RDTTDSPRRV VLPLSEYYEL SKRAHEAEEQ ASEKVAEALA QVVLAKESEA
701: RSLERLKETS EEMDEKKEEL EIALERAGRA NEGKLGAEQE LRKWRADHEQ RRRAHESTKR AVNPLNGPSR VFVEQKDPHH KEQESKVHMS GSSYEGFVPN
801: QKLQRKKSLF PLMGSVLSRK TRAQT
101: SDTDPEMLSN SGPAEVYISS TNDKADYPSS VDASEVNGGP VNVSNGAGTM LSDEMKAKED ETHHQTDTHT KLKMKQDSET TPESPYRGLI DTAAPFESVR
201: EAVTKFGGIV DWKAHKAQMI ERHKLIQPEL EKIRTEIPLC KEELEAAEAA KSQVVNELEH TKRLIEELKH HLEKVQVEEA QAKQDSELAQ LRAQEIEHGV
301: ADEASAIART QMEVAKERHK KAVAELKSVK EELKSVHEQY AALIDERDTA IKRAEEVISA GKEIEKRVEE LTLELIASKG SLELAHAAHH EAEERRIGAA
401: LAKEQDRIAW EKELHQAQEE LEQLDSNLKF NSDMQLNIDA NLHKLLSLKA ELSAYMVKKL TEEAEGVSKE HESEDSKHIS NSVKEALASK QKELQEVKAD
501: IEKAKAEANV LRFAAMTLRS ELDNEKASLV ALQQGEAMAS VAVSSLEAEL NRTKQEIESV RSKEAEAEEK VVELPMVLQQ ATQEAEEARV AAHLAHEELR
601: KAKEEFEQTK AAAAAAETRL SAVVKEAEAS AASERLAREA VQALQESKEA RDTTDSPRRV VLPLSEYYEL SKRAHEAEEQ ASEKVAEALA QVVLAKESEA
701: RSLERLKETS EEMDEKKEEL EIALERAGRA NEGKLGAEQE LRKWRADHEQ RRRAHESTKR AVNPLNGPSR VFVEQKDPHH KEQESKVHMS GSSYEGFVPN
801: QKLQRKKSLF PLMGSVLSRK TRAQT
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Arabidopsis Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.