Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034308.1-P | Field mustard | nucleus | 40.82 | 55.33 |
| Solyc05g042150.1.1 | Tomato | cytosol | 12.09 | 55.21 |
| Solyc07g026880.1.1 | Tomato | cytosol | 9.46 | 53.9 |
| GSMUA_Achr10P... | Banana | cytosol | 49.94 | 53.74 |
| CDX77048 | Canola | nucleus | 43.33 | 50.2 |
| CDY48180 | Canola | nucleus | 41.62 | 49.46 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 40.14 | 49.09 |
| Solyc04g078950.1.1 | Tomato | nucleus | 16.99 | 48.85 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 46.64 | 48.46 |
| Os03t0395300-01 | Rice | plasma membrane | 42.65 | 48.2 |
| AT2G26570.1 | Thale cress | nucleus | 44.24 | 48.08 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 44.7 | 47.8 |
| Bra041137.1-P | Field mustard | nucleus | 30.56 | 47.77 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 41.05 | 47.12 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 42.42 | 46.91 |
| Zm00001d029420_P002 | Maize | nucleus | 41.62 | 46.56 |
| EER92167 | Sorghum | nucleus | 41.39 | 46.3 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 41.85 | 46.28 |
| Zm00001d047240_P002 | Maize | nucleus | 41.28 | 46.11 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 40.94 | 46.03 |
| AT4G33390.1 | Thale cress | nucleus | 40.71 | 45.83 |
| KRH07566 | Soybean | nucleus | 31.81 | 45.37 |
| Solyc07g022910.2.1 | Tomato | plastid | 43.79 | 45.34 |
| CDX72400 | Canola | nucleus | 34.78 | 44.85 |
| CDY46119 | Canola | nucleus | 34.44 | 44.48 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 42.53 | 44.35 |
| PGSC0003DMT400011385 | Potato | nucleus | 45.5 | 44.19 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 42.08 | 43.88 |
| Zm00001d022161_P001 | Maize | nucleus | 40.02 | 43.88 |
| Os07t0619100-01 | Rice | plasma membrane | 40.71 | 43.7 |
| KXG36701 | Sorghum | nucleus | 41.05 | 43.64 |
| KRH45361 | Soybean | nucleus | 29.08 | 43.52 |
| PGSC0003DMT400039921 | Potato | nucleus | 42.3 | 43.34 |
| Solyc12g088830.1.1 | Tomato | nucleus | 41.28 | 42.94 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 39.45 | 42.93 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 40.02 | 42.7 |
| Bra033647.1-P | Field mustard | nucleus | 34.78 | 42.3 |
| CDY22380 | Canola | nucleus | 34.66 | 42.28 |
| CDX71526 | Canola | nucleus | 34.89 | 42.27 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 42.87 | 41.59 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 29.65 | 41.4 |
| KRH51982 | Soybean | nucleus | 44.13 | 40.61 |
| AT5G42880.1 | Thale cress | nucleus | 34.55 | 40.35 |
| CDY43212 | Canola | nucleus | 32.5 | 39.92 |
| CDY17054 | Canola | nucleus | 32.27 | 39.86 |
| AT1G45545.2 | Thale cress | nucleus | 34.09 | 39.71 |
| KRH61284 | Soybean | nucleus | 43.33 | 39.05 |
| Bra014049.1-P | Field mustard | nucleus | 33.41 | 38.86 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 22.23 | 38.54 |
| PGSC0003DMT400020677 | Potato | nucleus | 42.53 | 38.45 |
| CDY17108 | Canola | nucleus | 31.81 | 38.17 |
| Bra040259.1-P | Field mustard | nucleus | 31.81 | 38.11 |
| CDY62582 | Canola | nucleus | 31.7 | 37.98 |
| KRH15355 | Soybean | nucleus | 42.76 | 37.13 |
| Solyc08g015840.1.1 | Tomato | cytosol | 7.75 | 34.69 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 33.52 | 33.99 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 16.31 | 23.21 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 16.08 | 23.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.25 | 19.75 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P10120_001 | EnsemblPlants:GSMUA_Achr6T10120_001 | EnsemblPlantsGene:GSMUA_Achr6G10120_001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF2 | PFAM:PF05701 | SEG:seg | UniParc:UPI0002959425 | UniProt:M0T5R1 | MapMan:20.5.8.1 |
Description
paramyosin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G10120_001]
Coordinates
chr6:-:6764727..6768045
Molecular Weight (calculated)
97310.7 Da
IEP (calculated)
4.768
GRAVY (calculated)
-0.633
Length
877 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETKATEAM FSGEPPLSTT YSAECLPIKG PPNFSCHDEN HHQEEAMNNT EKKVARCITN DALLDHKADI AENVDRLCTD NQQEAITAGP ELSLNQFVSD
101: GTLSTQNILV DAIMDTNCER GIISKDSVQP VPQGASAIPD PRESSNVSDV SNTNVVVLTS GDITIAVPPF DPQNKELESI PNRHQDGTTV NLVDVQIIND
201: SAIPHESRNT EDSTPILPSE LNHQKDVGRM QKKAPELATS SKPVKNIHVN RGIVDTAAPF ESVKEAVTMF GGIVDWKAYR RNTLEKRKLL QLELERMQAD
301: IPECKKQFEA AEEAKAQVLK ELDRTNRIME ELKVNFEKAQ TEEAQAKQDS ELAQLRVKEM EQGIASESSV AAKAQLEVAK ARHEAAVAEL KILKAELKSL
401: QGEYVSLVNE RDMAIRKAQD ANSALKEIEK TAEELTLELI TTKESLESAH AAHLEAEERR IGAALAREQD YLTWEKELKH AEEEVQELNQ QVLLTRDLKS
501: KLETASTLLF NLKAELAAYM ESKLNQESVS FEDKLPDDVE ETTQNSVQAL ASTRKELEEV KVSIEKAKDE VVCLRVAAAS LKSELDRERA SLTNLQQREG
601: MASIAVSSLE AELDRTKQDL EVVRVKEKAA REKMVELPKL LQQAAQEADQ AKSVAQMARE ELRKSKEEAE QAKASASTIE IRLQAALKEI EATRASEKLA
701: LAAIKALQES EQAASIGGED SPRSVTLPLD EYFNLSKKAH EAEELAHERI AVAIAQIEAA KESEMKSLER LDEAYGEMSA RKEALKIAME NAEKAKEGKL
801: GAEQELRNWR AEHEQRRRAS DAAKESDVVD PSMSDPKSHI SEDSSDNGVS QVKIKKKKKS LVPKIVLFLA RKRAQPE
101: GTLSTQNILV DAIMDTNCER GIISKDSVQP VPQGASAIPD PRESSNVSDV SNTNVVVLTS GDITIAVPPF DPQNKELESI PNRHQDGTTV NLVDVQIIND
201: SAIPHESRNT EDSTPILPSE LNHQKDVGRM QKKAPELATS SKPVKNIHVN RGIVDTAAPF ESVKEAVTMF GGIVDWKAYR RNTLEKRKLL QLELERMQAD
301: IPECKKQFEA AEEAKAQVLK ELDRTNRIME ELKVNFEKAQ TEEAQAKQDS ELAQLRVKEM EQGIASESSV AAKAQLEVAK ARHEAAVAEL KILKAELKSL
401: QGEYVSLVNE RDMAIRKAQD ANSALKEIEK TAEELTLELI TTKESLESAH AAHLEAEERR IGAALAREQD YLTWEKELKH AEEEVQELNQ QVLLTRDLKS
501: KLETASTLLF NLKAELAAYM ESKLNQESVS FEDKLPDDVE ETTQNSVQAL ASTRKELEEV KVSIEKAKDE VVCLRVAAAS LKSELDRERA SLTNLQQREG
601: MASIAVSSLE AELDRTKQDL EVVRVKEKAA REKMVELPKL LQQAAQEADQ AKSVAQMARE ELRKSKEEAE QAKASASTIE IRLQAALKEI EATRASEKLA
701: LAAIKALQES EQAASIGGED SPRSVTLPLD EYFNLSKKAH EAEELAHERI AVAIAQIEAA KESEMKSLER LDEAYGEMSA RKEALKIAME NAEKAKEGKL
801: GAEQELRNWR AEHEQRRRAS DAAKESDVVD PSMSDPKSHI SEDSSDNGVS QVKIKKKKKS LVPKIVLFLA RKRAQPE
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Arabidopsis Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.