Factsheet for GSMUA_Achr4P18510_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16580_001	Banana	cytosol	78.47	78.08
GSMUA_AchrUn_...	Banana	nucleus	61.66	59.72
Os12t0271600-01	Rice	plasma membrane	62.81	59.51
OQU79020	Sorghum	nucleus	62.32	58.68
Zm00001d041088_P004	Maize	nucleus	60.03	56.7
Zm00001d023629_P001	Maize	nucleus	60.2	56.6
TraesCS4D01G125200.1	Wheat	nucleus	56.44	54.57
TraesCS4A01G188200.1	Wheat	nucleus	56.61	54.56
TraesCS4B01G127500.1	Wheat	nucleus	56.28	54.42
TraesCS5B01G103500.1	Wheat	nucleus	56.28	53.99
HORVU5Hr1G029890.1	Barley	nucleus	56.61	53.8
VIT_19s0015g00740.t01	Wine grape	nucleus	56.93	53.69
TraesCS5A01G098800.2	Wheat	cytosol	55.95	53.68
TraesCS5D01G110400.2	Wheat	cytosol	55.3	53.05
KRG98464	Soybean	mitochondrion	54.98	51.61
KRH46399	Soybean	cytosol	54.81	51.45
PGSC0003DMT400057359	Potato	nucleus	55.46	50.37
Solyc07g065680.2.1	Tomato	nucleus	55.3	50.22
KRH75103	Soybean	nucleus	19.09	48.75
CDY28631	Canola	nucleus	49.27	46.32
Bra002870.1-P	Field mustard	nucleus	48.94	45.94
CDY36768	Canola	nucleus	48.29	45.89
CDY17364	Canola	nucleus	48.78	45.79
AT5G55860.1	Thale cress	nucleus	48.12	45.45
CDY11973	Canola	nucleus	47.63	45.41
Bra028956.1-P	Field mustard	nucleus	46.82	44.57
CDY11974	Canola	cytosol, nucleus, plastid	21.04	44.48
KRH73920	Soybean	nucleus	46.49	43.91
AT1G12150.2	Thale cress	cytosol	34.91	39.05
CDY31245	Canola	cytosol	34.91	39.05
KRH11615	Soybean	cytosol, mitochondrion, nucleus	36.05	38.37
Bra016786.1-P	Field mustard	cytosol	33.77	37.84
CDY21038	Canola	cytosol	33.77	37.84
KRH36620	Soybean	cytosol, mitochondrion, nucleus	35.24	37.44
KRH51206	Soybean	cytosol	33.12	36.91
Solyc04g015110.2.1	Tomato	plastid	36.38	35.79
PGSC0003DMT400050839	Potato	nucleus	36.22	35.75
KRH01945	Soybean	cytosol, mitochondrion, nucleus	33.12	35.37
PGSC0003DMT400034621	Potato	mitochondrion, plastid	24.47	33.26
CDY09639	Canola	cytosol	25.77	29.76
CDY58167	Canola	cytosol	25.12	29.62
CDX90485	Canola	cytosol	25.45	29.43
CDY42964	Canola	cytosol	24.96	29.42
Bra026233.1-P	Field mustard	cytosol	24.96	29.37
CDY50127	Canola	cytosol	24.96	29.25
CDY35594	Canola	nucleus	24.8	29.06
Bra021064.1-P	Field mustard	cytosol	24.47	28.79
AT4G17210.1	Thale cress	cytosol, plastid	24.31	28.27
CDY15972	Canola	cytosol	34.75	23.75
CDY26542	Canola	cytosol	34.09	20.71
Bra026987.1-P	Field mustard	cytosol	33.77	20.52
GSMUA_Achr5P24580_001	Banana	cytosol	17.78	17.36
GSMUA_Achr5P17590_001	Banana	nucleus	23.0	17.2
GSMUA_Achr6P10120_001	Banana	nucleus	23.0	16.08
GSMUA_Achr9P27100_001	Banana	nucleus	21.37	15.94
GSMUA_Achr10P...	Banana	cytosol	20.07	15.09

Protein Annotations

EnsemblPlants:GSMUA_Achr4P18510_001	EnsemblPlants:GSMUA_Achr4T18510_001	EnsemblPlantsGene:GSMUA_Achr4G18510_001	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054
PANTHER:PTHR32054:SF3	PFAM:PF05701	SEG:seg	UniParc:UPI0002951A0E	UniProt:M0SQ14	MapMan:35.1

Description

prefoldin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G18510_001]

Coordinates

chr4:-:19410869..19413707

Molecular Weight (calculated)

68149.3 Da

IEP (calculated)

4.974

GRAVY (calculated)

-0.762

Length

613 amino acids

Sequence
(BLAST)

001: MGTNTQQNSV DSPKTPKAEI DTRAPFESVK AAVSLFGEVA FTSDRATVRK PKPPPIERAL AKETQLHLAK KELNKYKEQL TNAETTRIQA LGELEWAKRT
101: VEELTNKLNS INELKELALK ATEAAETQTK KLEDVSSVEN TRQGGVWEQE FDNAREQYAV AITELDAAKQ ELRRIKKDFE ISMESKLTAI EQEAEAKQLH
201: DGNTEKVAQL SEEISAAQES LMHVKLATDQ ARQEESKIRI EKDAAKQSYK QALEDAEKKL ASLKKEFDPE VHKNLEAKLA ETTAKIGAVQ KEIEDAQTSD
301: VEFVTTVTAE LDGAKEMLQK LAEEESSLRS LVESLKLELE AVKKEHTELK EKDAETESVV SNLHVKLQKC KAELEAAIVA ESKATSASDD LVSALHQLSS
401: ESQNALQEAE EMKKSAEELR GEAEAARTTL DEAEKKLQSG ANITISKEEY ESLTRKVVES EKLTEMKVAA AIAQVEAVRA SENEAIKKLE AARKEMEDME
501: TATEEALKRA EMAEAAKKAV EGEMRRWREK EQKRAAETAS RILAETQMST EALPPRPMVQ SVKTAEKNEE NRKVVRSTVS KKALLPNLSG IFHRKKSQVD
601: GGSPSYLPGE KPV

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.