Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057359 | Potato | nucleus | 92.3 | 92.3 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 64.89 | 67.38 |
| KRH75103 | Soybean | nucleus | 23.41 | 65.83 |
| KRG98464 | Soybean | mitochondrion | 61.93 | 64.01 |
| KRH46399 | Soybean | cytosol | 61.48 | 63.55 |
| AT5G55860.1 | Thale cress | nucleus | 54.22 | 56.39 |
| CDY17364 | Canola | nucleus | 54.22 | 56.05 |
| CDY28631 | Canola | nucleus | 54.07 | 55.98 |
| Bra002870.1-P | Field mustard | nucleus | 54.07 | 55.9 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 50.22 | 55.3 |
| KRH73920 | Soybean | nucleus | 53.04 | 55.16 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 49.78 | 54.55 |
| CDY11973 | Canola | nucleus | 50.37 | 52.88 |
| CDY36768 | Canola | nucleus | 50.22 | 52.56 |
| Os12t0271600-01 | Rice | plasma membrane | 50.07 | 52.24 |
| Bra028956.1-P | Field mustard | nucleus | 49.63 | 52.02 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 22.22 | 51.72 |
| OQU79020 | Sorghum | nucleus | 49.33 | 51.15 |
| Zm00001d041088_P004 | Maize | nucleus | 48.74 | 50.69 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 47.11 | 50.16 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 46.96 | 49.84 |
| Zm00001d023629_P001 | Maize | nucleus | 48.0 | 49.69 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 46.67 | 49.68 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 45.04 | 47.57 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 45.33 | 47.44 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 44.44 | 46.95 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 44.15 | 46.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.41 | 42.02 |
| Solyc04g015110.2.1 | Tomato | plastid | 34.52 | 37.4 |
| Solyc04g078950.1.1 | Tomato | nucleus | 12.44 | 27.54 |
| Solyc07g026880.1.1 | Tomato | cytosol | 5.33 | 23.38 |
| Solyc05g042150.1.1 | Tomato | cytosol | 6.52 | 22.92 |
| Solyc12g088830.1.1 | Tomato | nucleus | 24.3 | 19.45 |
| Solyc08g015840.1.1 | Tomato | cytosol | 5.63 | 19.39 |
| Solyc07g022910.2.1 | Tomato | plastid | 23.41 | 18.65 |
Protein Annotations
| EnsemblPlants:Solyc07g065680.2.1 | EnsemblPlantsGene:Solyc07g065680.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0008150 | GO:GO:0009903 | GO:GO:0009904 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF3 | PFAM:PF05701 | SEG:seg |
| UniParc:UPI000276AE77 | UniProt:K4CHP6 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7:+:67355956..67358910
Molecular Weight (calculated)
75462.7 Da
IEP (calculated)
5.886
GRAVY (calculated)
-0.813
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKDRNKPT GSPKVHVGEI DTSAPFQSVK DAVNLFGEGA FSGEKPAIRK ARPQSAERVL AKETRLHLAQ KELNKLKDQL KNAETTRAQA LTELERAKRT
101: VDDLTKKLKI VCESKDLAVK ATEAAKSQVN QLEAPNDGSV MGKDGSWKVD LETAREKYMA EIADLDKAKQ ELRKIRQDCN TFMEEKGGAI EQAAEAERTA
201: KANMERAREL SKEIAVVHES VDQLKLACVQ EREEEAKIYA EKDVQKQSYK AKLEESAEKL LALKKETDAD LAKSLEAQLA ETMSEIEALR KEMDSAKSSD
301: LDKVKVVTAE LDDAKESLRK VAEEESTLQT LVETLKLDLE NIKKEHYDLK EKEAETESLA GGLHVKLRKA KSELEVAVAE EAKARGASEE MISTLHQLIL
401: ETENAKLEAE EMKMQAEELK KEAEAARMAL EDAEKKLKVA MEEAEEAKSA EAEARDQIKI LSEKTTAARS STSESGARIT LSRDEFDSLS RKVEELDNLA
501: EIRVGAAMAQ VEAVKASENE ALKKLESTQK EINDIKTATQ EALKKAEMAE AAKKAVEGEL RRWREREQKK AAEAASRILA ETHMNYRSSP QSYTVQKEKP
601: SEKFMESHVK MHSPVETKKQ NTQENIMEMR KLQKAKTSVS KKKVLMPSIS GIFHKKKNQV EGDSPSYLPG EKPVW
101: VDDLTKKLKI VCESKDLAVK ATEAAKSQVN QLEAPNDGSV MGKDGSWKVD LETAREKYMA EIADLDKAKQ ELRKIRQDCN TFMEEKGGAI EQAAEAERTA
201: KANMERAREL SKEIAVVHES VDQLKLACVQ EREEEAKIYA EKDVQKQSYK AKLEESAEKL LALKKETDAD LAKSLEAQLA ETMSEIEALR KEMDSAKSSD
301: LDKVKVVTAE LDDAKESLRK VAEEESTLQT LVETLKLDLE NIKKEHYDLK EKEAETESLA GGLHVKLRKA KSELEVAVAE EAKARGASEE MISTLHQLIL
401: ETENAKLEAE EMKMQAEELK KEAEAARMAL EDAEKKLKVA MEEAEEAKSA EAEARDQIKI LSEKTTAARS STSESGARIT LSRDEFDSLS RKVEELDNLA
501: EIRVGAAMAQ VEAVKASENE ALKKLESTQK EINDIKTATQ EALKKAEMAE AAKKAVEGEL RRWREREQKK AAEAASRILA ETHMNYRSSP QSYTVQKEKP
601: SEKFMESHVK MHSPVETKKQ NTQENIMEMR KLQKAKTSVS KKKVLMPSIS GIFHKKKNQV EGDSPSYLPG EKPVW
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.