CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98464	Soybean	mitochondrion	94.49	94.49
KRH75103	Soybean	nucleus	33.38	90.83
VIT_19s0015g00740.t01	Wine grape	nucleus	70.44	70.77
KRH73920	Soybean	nucleus	69.68	70.11
Solyc07g065680.2.1	Tomato	nucleus	63.55	61.48
PGSC0003DMT400057359	Potato	nucleus	63.25	61.19
CDY17364	Canola	nucleus	54.82	54.82
GSMUA_Achr4P18510_001	Banana	nucleus	51.45	54.81
CDY28631	Canola	nucleus	54.67	54.75
AT5G55860.1	Thale cress	nucleus	54.36	54.7
Bra002870.1-P	Field mustard	nucleus	54.67	54.67
GSMUA_Achr7P16580_001	Banana	cytosol	50.69	53.73
Os12t0271600-01	Rice	plasma membrane	52.07	52.55
CDY36768	Canola	nucleus	51.45	52.09
CDY11973	Canola	nucleus	51.0	51.79
Zm00001d041088_P004	Maize	nucleus	51.3	51.62
OQU79020	Sorghum	nucleus	51.45	51.61
Bra028956.1-P	Field mustard	nucleus	50.54	51.24
Zm00001d023629_P001	Maize	nucleus	50.08	50.15
TraesCS4B01G127500.1	Wheat	nucleus	47.93	49.37
TraesCS4A01G188200.1	Wheat	nucleus	47.93	49.21
TraesCS4D01G125200.1	Wheat	nucleus	47.63	49.05
CDY11974	Canola	cytosol, nucleus, plastid	21.13	47.59
TraesCS5D01G110400.2	Wheat	cytosol	46.09	47.1
TraesCS5A01G098800.2	Wheat	cytosol	46.09	47.1
HORVU5Hr1G029890.1	Barley	nucleus	46.4	46.98
TraesCS5B01G103500.1	Wheat	nucleus	45.94	46.95
GSMUA_AchrUn_...	Banana	nucleus	41.04	42.34
KRH11615	Soybean	cytosol, mitochondrion, nucleus	36.75	41.67
KRH36620	Soybean	cytosol, mitochondrion, nucleus	35.68	40.38
KRH51206	Soybean	cytosol	33.38	39.64
KRH01945	Soybean	cytosol, mitochondrion, nucleus	33.84	38.5
KRH07566	Soybean	nucleus	22.05	23.41
KRH45361	Soybean	nucleus	19.75	22.01
KRH51982	Soybean	nucleus	26.03	17.84
KRH61284	Soybean	nucleus	25.88	17.37
KRH15355	Soybean	nucleus	25.11	16.24

Protein Annotations

EntrezGene:100816361	MapMan:35.1	EMBL:ACUP02005342	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G330800	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	UniProt:I1KYL0	ProteinID:KRH46398.1	EnsemblPlants:KRH46399
ProteinID:KRH46399	ProteinID:KRH46399.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF3	UniParc:UPI0002338E1F
InterPro:Web	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:44855204..44861068

Molecular Weight (calculated)

72589.9 Da

IEP (calculated)

5.573

GRAVY (calculated)

-0.744

Length

653 amino acids

Sequence
(BLAST)

001: MVAKIRQSAT ESPNPKPEVG EIDTSPPFQS VKDAVSLFGE GAFSDEKPIF KKAKPYSAER VLAKETQLHV AQKELNKLRE QVKNAETTKA QALVELERAK
101: RTVEDLTQKI KVISDSREIA IEATAAAKCQ AKQLTEEKYG VPGGTNGAWK EELESAVKRY ASVMTELDAA KQALSKTRQE YDSSLDEKMF AFKQAAEAGD
201: ALKENTERAS ELSKEISAVK ESVEQAKLAS IVAQQQQTMI LAEKDVLRQS YKATLGQSEK KLLALKKEFS PELAKNLEMQ LAETMNEIGT LQKEMENKRT
301: SDLDSVKSVT LELDDAKESL QKVADEESSL RSLVESLKGE LENLKREHSE LKEKESETES IVGNLHVKLR KSKSELEACM ARESKVRGAS EEMILTLSQL
401: TSETENARRE AEDMKNRTAE LKKEAEVTML AFEEAEKKLK VALEEAEAAK AAEKNALDHI TVLTERTTAA RASTSESGAV ITISKEEFDS LSHKVEESDK
501: LADMKVAAAK AQVEAVKASE NEALKRLETT QKEIEDMKTA TQEALKKAEM AEAAKRAVES ELRRWREREQ KKAAEAASRI LAETQVSTES SPQHYRIQKQ
601: NPPRTTVEVK RFEKEKVSVS KKALLPNISG IFQRKKNQVE GGSPSYLPGE NPV

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.