CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75103	Soybean	nucleus	26.5	71.67
KRH46399	Soybean	cytosol	70.11	69.68
KRG98464	Soybean	mitochondrion	69.49	69.07
VIT_19s0015g00740.t01	Wine grape	nucleus	60.55	60.46
Solyc07g065680.2.1	Tomato	nucleus	55.16	53.04
PGSC0003DMT400057359	Potato	nucleus	54.24	52.15
CDY17364	Canola	nucleus	47.92	47.63
Bra002870.1-P	Field mustard	nucleus	47.77	47.47
AT5G55860.1	Thale cress	nucleus	47.46	47.46
CDY28631	Canola	nucleus	47.3	47.09
GSMUA_Achr4P18510_001	Banana	nucleus	43.91	46.49
Os12t0271600-01	Rice	plasma membrane	45.92	46.06
CDY36768	Canola	nucleus	45.45	45.74
Bra028956.1-P	Field mustard	nucleus	45.15	45.5
OQU79020	Sorghum	nucleus	45.61	45.47
CDY11973	Canola	nucleus	44.99	45.41
Zm00001d041088_P004	Maize	nucleus	45.15	45.15
GSMUA_Achr7P16580_001	Banana	cytosol	42.84	45.13
Zm00001d023629_P001	Maize	nucleus	45.15	44.94
CDY11974	Canola	cytosol, nucleus, plastid	19.41	43.45
TraesCS4B01G127500.1	Wheat	nucleus	42.22	43.22
TraesCS4A01G188200.1	Wheat	nucleus	42.22	43.08
TraesCS4D01G125200.1	Wheat	nucleus	41.91	42.9
TraesCS5D01G110400.2	Wheat	cytosol	41.91	42.57
TraesCS5B01G103500.1	Wheat	nucleus	41.91	42.57
TraesCS5A01G098800.2	Wheat	cytosol	41.91	42.57
HORVU5Hr1G029890.1	Barley	nucleus	42.06	42.33
KRH11615	Soybean	cytosol, mitochondrion, nucleus	34.98	39.41
KRH36620	Soybean	cytosol, mitochondrion, nucleus	34.51	38.82
GSMUA_AchrUn_...	Banana	nucleus	36.83	37.76
KRH51206	Soybean	cytosol	31.28	36.91
KRH01945	Soybean	cytosol, mitochondrion, nucleus	32.2	36.41
KRH07566	Soybean	nucleus	20.34	21.46
KRH45361	Soybean	nucleus	18.03	19.97
KRH51982	Soybean	nucleus	24.35	16.58
KRH61284	Soybean	nucleus	23.73	15.83
KRH15355	Soybean	nucleus	23.42	15.05

Protein Annotations

EntrezGene:100817643	MapMan:35.1	EMBL:ACUP02001291	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G301400	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	UniProt:I1JJK4	EnsemblPlants:KRH73920	ProteinID:KRH73920
ProteinID:KRH73920.1	ProteinID:KRH73921.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF3	UniParc:UPI00023BCD1E
InterPro:Web	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:47728370..47731748

Molecular Weight (calculated)

72472.0 Da

IEP (calculated)

5.091

GRAVY (calculated)

-0.661

Length

649 amino acids

Sequence
(BLAST)

001: MVAKIRQSAA NSPNPTKPVV GEIDTSPPFQ SVKDAVSLFG EGAFSGETPP NAPIKKAKSY FAESVWAKER QLHLAQKDLK KLKEQLKNAE TTKAQVLVEL
101: EKAKRVVEDL SQKLKVLSES RESAIQATEA SKSQAKQLKE EKCGDPDGTN HAWKEELETA VNNFASVITE LDVAKQELSK IRQGYDLSLE ARVSALKQTA
201: EAEDAMKANM ERACEVSKEI LVVQESVEKM NAESVQAHQL QEETLAGQKV LRQSYEAILE ESKKKLLDLK KEFNPELIKN LEVQLTETMI EIGVLQKQIE
301: NKKTSDLDSL RSVTQDLGDA KESLQRVTGQ EDTLRSMVEA LGMELENVKR EHSELKEKES KTESIVENLQ VELWKSEFEL EAYLAGESKA RGASEEMILT
401: LKQLFSETEN ARREIEDMKN ETAELKMEAA VTKLVLEDAE TKLRVAVEEV EAANAAEASA LDQIKVLSMR TSPSHSSPSE PGARITISRE EFESLVHKVE
501: ESDKLADIKV AAATAQVEAA KASENEVLKR LEETQKEIED MKSETQAALK RAEMAEAAKR AVEGELRKWR EREQKKAAEA ASQILAETLI SPELSPQHYR
601: IQIQNSPPNR VEMKKLEKGK VSVSKKVLLH NISGIFHRKR NHVEGESSS

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.