Factsheet for TraesCS5A01G098800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G103500.1	Wheat	nucleus	97.03	97.03
HORVU5Hr1G029890.1	Barley	nucleus	92.8	91.94
TraesCS5D01G110400.2	Wheat	cytosol	91.71	91.71
Os12t0271600-01	Rice	plasma membrane	80.13	79.13
OQU79020	Sorghum	nucleus	79.34	77.88
Zm00001d041088_P004	Maize	nucleus	76.53	75.35
Zm00001d023629_P001	Maize	nucleus	74.96	73.47
TraesCS4A01G188200.1	Wheat	nucleus	70.27	70.6
GSMUA_Achr4P18510_001	Banana	nucleus	53.68	55.95
GSMUA_Achr7P16580_001	Banana	cytosol	51.02	52.92
VIT_19s0015g00740.t01	Wine grape	nucleus	48.2	47.38
KRG98464	Soybean	mitochondrion	47.42	46.4
KRH46399	Soybean	cytosol	47.1	46.09
GSMUA_AchrUn_...	Banana	nucleus	45.54	45.97
Solyc07g065680.2.1	Tomato	nucleus	47.57	45.04
PGSC0003DMT400057359	Potato	nucleus	47.42	44.89
AT5G55860.1	Thale cress	nucleus	44.44	43.76
CDY28631	Canola	nucleus	44.44	43.56
Bra002870.1-P	Field mustard	nucleus	44.29	43.34
CDY17364	Canola	nucleus	44.13	43.19
KRH75103	Soybean	nucleus	15.96	42.5
KRH73920	Soybean	nucleus	42.57	41.91
CDY36768	Canola	nucleus	42.1	41.71
CDY11973	Canola	nucleus	41.94	41.68
Bra028956.1-P	Field mustard	nucleus	41.78	41.46
CDY11974	Canola	cytosol, nucleus, plastid	18.31	40.34
KRH11615	Soybean	cytosol, mitochondrion, nucleus	35.52	39.41
KRH36620	Soybean	cytosol, mitochondrion, nucleus	34.74	38.47
KRH51206	Soybean	cytosol	33.02	38.36
CDY31245	Canola	cytosol	31.77	37.04
AT1G12150.2	Thale cress	cytosol	31.77	37.04
Bra016786.1-P	Field mustard	cytosol	31.61	36.93
CDY21038	Canola	cytosol	31.46	36.75
KRH01945	Soybean	cytosol, mitochondrion, nucleus	32.86	36.59
PGSC0003DMT400034621	Potato	mitochondrion, plastid	25.82	36.59
PGSC0003DMT400050839	Potato	nucleus	34.9	35.91
Solyc04g015110.2.1	Tomato	plastid	34.9	35.79
CDX90485	Canola	cytosol	24.73	29.81
CDY42964	Canola	cytosol	24.26	29.81
CDY35594	Canola	nucleus	24.26	29.64
CDY09639	Canola	cytosol	24.57	29.57
Bra026233.1-P	Field mustard	cytosol	24.1	29.56
CDY58167	Canola	cytosol	23.63	29.04
CDY50127	Canola	cytosol	23.32	28.49
AT4G17210.1	Thale cress	cytosol, plastid	23.32	28.27
Bra021064.1-P	Field mustard	cytosol	22.69	27.83
CDY15972	Canola	cytosol	31.46	22.41
TraesCS2A01G166400.1	Wheat	cytosol	25.35	20.43
TraesCS1A01G248800.1	Wheat	nucleus	24.26	19.87
Bra026987.1-P	Field mustard	cytosol	31.14	19.72
CDY26542	Canola	cytosol	30.99	19.62
TraesCS5A01G238500.1	Wheat	cytosol	20.5	16.58

Protein Annotations

EnsemblPlants:TraesCS5A01G098800.2	EnsemblPlantsGene:TraesCS5A01G098800	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF3
PFAM:PF05701	SEG:seg	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5A:-:140591456..140595505

Molecular Weight (calculated)

70793.6 Da

IEP (calculated)

5.240

GRAVY (calculated)

-0.774

Length

639 amino acids

Sequence
(BLAST)

001: MATKVRPPST DAEKMEVGEI DTRAPFESVK AAVSLFGEVR FSSDKSAARK PKAPQAEQKV LAKETELHLA QKELNKYREQ LSNAETARLQ SLSELEKARK
101: TVDELTTKLD AINKSKEMAI QATEDTKTRT KQLEGGNPKE AVRKDSPLKQ ELDSARQQYA VALADLDAAK QELRKLKKDF ETSLDMRLSA AQKEEESLHS
201: IEANKEKAAQ LRNESKAIQE SLMHMKAATE QLQEEESQVL DEKDVARNAY KQALEEAEKK LSYLRNEFDP AAYKTLKEKL DETNSEISSM QKKIEDARAL
301: DLETVAAITT ELDDAKEMLQ KVAEEESTLQ NLVESLKLEL AAAKQDHSQL KEKDTDTESI VADLHVKLQK CKSELEVAVC AESEAATASD DLMLALQQLS
401: CESKTALQEA EMMQKSAAEL RIEAEAARVA LTEAEERLQS ALKEAEEAKA AEAKALDQIK QLSDRASAVQ ASTSEPGGKV TISKAEFESL SRKLKESEKL
501: SEMKVAAAMA QVEAVRASEN EAIQKMKTAR REMEDMELAT EEALKRAEMA EAAKKAVEGE LKRWREKEQK KAAESVSSAE AQAHATTLSS VHKAPAGKPT
601: EKNDGHQRNS RMLLRKGFVL PNITGMFHKK KGHVDGSSP

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.