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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
plasma membrane: 19526560
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 19526560 doi
Y Cheng, Y Qi, Q Zhu, X Chen, N Wang, X Zhao, H Chen, X Cui, L Xu, W Zhang
Department of Biochemistry and Molecular Biology, College of Life Science, Nanjing Agricultural University, Nanjing, Jiangsu, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU79020 Sorghum nucleus 85.32 84.79
Zm00001d041088_P004 Maize nucleus 82.38 82.13
Zm00001d023629_P001 Maize nucleus 82.38 81.75
TraesCS5A01G098800.2 Wheat cytosol 79.13 80.13
TraesCS5B01G103500.1 Wheat nucleus 78.67 79.66
HORVU5Hr1G029890.1 Barley nucleus 78.83 79.07
TraesCS5D01G110400.2 Wheat cytosol 75.12 76.06
GSMUA_Achr4P18510_001 Banana nucleus 59.51 62.81
GSMUA_Achr7P16580_001 Banana cytosol 55.95 58.77
VIT_19s0015g00740.t01 Wine grape nucleus 54.1 53.85
KRH46399 Soybean cytosol 52.55 52.07
KRG98464 Soybean mitochondrion 52.55 52.07
GSMUA_AchrUn_... Banana nucleus 50.08 51.18
Solyc07g065680.2.1 Tomato nucleus 52.24 50.07
PGSC0003DMT400057359 Potato nucleus 51.62 49.48
AT5G55860.1 Thale cress nucleus 47.45 47.3
KRH75103 Soybean nucleus 17.47 47.08
Bra002870.1-P Field mustard nucleus 47.3 46.86
CDY28631 Canola nucleus 47.14 46.78
CDY17364 Canola nucleus 47.14 46.71
KRH73920 Soybean nucleus 46.06 45.92
Bra028956.1-P Field mustard nucleus 44.82 45.03
CDY11973 Canola nucleus 44.51 44.79
CDY36768 Canola nucleus 44.51 44.65
CDY11974 Canola cytosol, nucleus, plastid 18.39 41.03
AT1G12150.2 Thale cress cytosol 34.62 40.88
PGSC0003DMT400050839 Potato nucleus 39.1 40.74
KRH51206 Soybean cytosol 34.62 40.73
Solyc04g015110.2.1 Tomato plastid 38.79 40.29
KRH11615 Soybean cytosol, mitochondrion, nucleus 35.86 40.28
KRH36620 Soybean cytosol, mitochondrion, nucleus 35.7 40.03
CDY31245 Canola cytosol 33.23 39.23
KRH01945 Soybean cytosol, mitochondrion, nucleus 34.31 38.68
Bra016786.1-P Field mustard cytosol 32.61 38.57
CDY21038 Canola cytosol 32.46 38.39
PGSC0003DMT400034621 Potato mitochondrion, plastid 26.74 38.36
CDY35594 Canola nucleus 25.97 32.12
CDY42964 Canola cytosol 25.81 32.12
Bra026233.1-P Field mustard cytosol 25.81 32.05
AT4G17210.1 Thale cress cytosol, plastid 25.97 31.88
CDY58167 Canola cytosol 25.35 31.54
CDX90485 Canola cytosol 25.5 31.13
CDY09639 Canola cytosol 25.35 30.89
CDY50127 Canola cytosol 24.88 30.78
Bra021064.1-P Field mustard cytosol 24.42 30.33
CDY15972 Canola cytosol 33.38 24.08
Bra026987.1-P Field mustard cytosol 33.38 21.41
CDY26542 Canola cytosol 33.08 21.21
Os03t0395300-01 Rice plasma membrane 25.35 21.13
Os06t0314000-01 Rice cytosol, nucleus 15.77 20.16
Os07t0619100-01 Rice plasma membrane 24.57 19.46
Os09t0458000-00 Rice plasma membrane 19.94 15.45
Protein Annotations
MapMan:35.1EntrezGene:4351956ProteinID:ABA97398.1EMBL:AK070395ProteinID:BAF29570.1ProteinID:BAT16650.1
ProteinID:BAT16652.1ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0008150GO:GO:0009903GO:GO:0009904GO:GO:0009987GO:GO:0016043
EnsemblPlantsGene:Os12g0271600EnsemblPlants:Os12t0271600-01PFAM:PF05701PANTHER:PTHR32054PANTHER:PTHR32054:SF3UniProt:Q2QU66
UniParc:UPI0000681588InterPro:WebRefSeq:XP_015620199.1SEG:seg::
Description
brassinosteroid receptor kinase (BRI1)-interacting protein 134, BRI1-interacting protein 134, brassinosteroid receptor kinase-interacting protein 134Similar to Myosin heavy chain-like. (Os12t0271600-01);Hypothetical conserved gene. (Os12t0271600-02)
Coordinates
chr12:+:9907483..9914893
Molecular Weight (calculated)
71372.8 Da
IEP (calculated)
5.106
GRAVY (calculated)
-0.818
Length
647 amino acids
Sequence
(BLAST)
001: MATKLRQPST DAEKTEVGEI DTRAPFESVK AAVSLFGEVR FSSDKSAARK PKPPQAERVL AKETELHLAQ KELNKYKDQL NNAETTRVQA LSELEKAKKT
101: VEDLTNKLDA INKSKELAIQ ATEDAKTRTK QLEGGDSLEA VGKDGPLKQE LDVAREQYVV ALADLDAAKQ ELRKLKKDFE ASLDMRLAAA QQEEESLHLA
201: ETNKQKADQL RKEIATIQES LTHVKAATEQ AHEEEAQILA EKDVTRKTYK QALEEAEKKL SSLKKDFDPA VYKSLKEKLD ETNLEISSMQ KKIEDARAQD
301: LESIATVSTE LDDAKEMLQK VAEEESSLRS LVESLKQELE AVKEEHDQLK QKDTETESIV GDLHVKLQKC KSELEAAVAA ESKATSASDD LMLALQQLSS
401: ESKNALQEAE VMQKSAADLR DEAEAARVAL AEAEQKLQSA LKEAEEAKSA EAKALDQIKQ LSERASAARA STSESGAKIT ISKEEFESLS RKVEESEKLS
501: EMKVAAAMAQ VEAVRASENE AIKKLEAARK EMEDMELATE EALKRAEMAE AAKRAVEGEL RRWREKEQKK AAEAQPAPEA QAHGTASSPV QKASAGKANE
601: KNDGPHKNSR TLLKKSFMLP NITSMFHKKK NHADGSSPSH LPGDKSV
Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.