Factsheet for Solyc04g015110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050839	Potato	nucleus	91.17	91.47
KRH11615	Soybean	cytosol, mitochondrion, nucleus	37.08	40.1
KRH36620	Soybean	cytosol, mitochondrion, nucleus	36.28	39.17
Os12t0271600-01	Rice	plasma membrane	40.29	38.79
KRH51206	Soybean	cytosol	34.19	38.73
OQU79020	Sorghum	nucleus	39.65	37.94
Zm00001d023629_P001	Maize	nucleus	39.17	37.42
Zm00001d041088_P004	Maize	nucleus	38.68	37.13
GSMUA_Achr4P18510_001	Banana	nucleus	35.79	36.38
KRH01945	Soybean	cytosol, mitochondrion, nucleus	33.23	36.06
GSMUA_Achr7P16580_001	Banana	cytosol	35.47	35.88
Bra016786.1-P	Field mustard	cytosol	30.82	35.1
TraesCS5B01G103500.1	Wheat	nucleus	35.96	35.05
CDY21038	Canola	cytosol	30.66	34.92
TraesCS5A01G098800.2	Wheat	cytosol	35.79	34.9
TraesCS4B01G127500.1	Wheat	nucleus	35.47	34.86
TraesCS4A01G188200.1	Wheat	nucleus	35.47	34.75
TraesCS4D01G125200.1	Wheat	nucleus	35.31	34.7
AT1G12150.2	Thale cress	cytosol	30.5	34.67
CDY31245	Canola	cytosol	30.5	34.67
Solyc07g065680.2.1	Tomato	nucleus	37.4	34.52
TraesCS5D01G110400.2	Wheat	cytosol	35.15	34.27
HORVU5Hr1G029890.1	Barley	nucleus	35.15	33.95
GSMUA_AchrUn_...	Banana	nucleus	33.87	33.33
AT4G17210.1	Thale cress	cytosol, plastid	26.16	30.93
CDY09639	Canola	cytosol	24.72	29.0
CDX90485	Canola	cytosol	24.56	28.87
CDY58167	Canola	cytosol	23.92	28.65
CDY35594	Canola	nucleus	23.6	28.11
Bra026233.1-P	Field mustard	cytosol	23.43	28.02
Bra021064.1-P	Field mustard	cytosol	23.43	28.02
CDY50127	Canola	cytosol	23.43	27.92
CDY42964	Canola	cytosol	23.11	27.69
Solyc07g026880.1.1	Tomato	cytosol	6.1	24.68
Solyc05g042150.1.1	Tomato	cytosol	7.22	23.44
Solyc08g015840.1.1	Tomato	cytosol	7.22	22.96
Solyc04g078950.1.1	Tomato	nucleus	9.95	20.33
CDY15972	Canola	cytosol	28.89	20.07
CDY26542	Canola	cytosol	29.7	18.34
Bra026987.1-P	Field mustard	cytosol	29.21	18.04
Solyc12g088830.1.1	Tomato	nucleus	23.92	17.68
Solyc07g022910.2.1	Tomato	plastid	23.11	17.0

Protein Annotations

EnsemblPlants:Solyc04g015110.2.1	EnsemblPlantsGene:Solyc04g015110.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0009903	GO:GO:0009904	GO:GO:0009987	GO:GO:0016043
InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF3	PFAM:PF05701	SEG:seg
UniParc:UPI0002766800	UniProt:K4BQ14	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4:+:5283852..5286177

Molecular Weight (calculated)

69219.6 Da

IEP (calculated)

4.798

GRAVY (calculated)

-0.920

Length

623 amino acids

Sequence
(BLAST)

001: MFGFSIRTGK QNASGSPSSK TGSPSSVGSP KTAGSTGSPK AEVGEIDTRA PFQSVRAAVS LFGDTGSSPQ AKPTIKRSKT IEERVLEKES RLHLALRELD
101: GFKEQIRSTE TTKTHALRDL EKAKRTLQEL TGKLETLCET KQAAIEATET AKARAIELEE QKSNKPPVGT DAWKQNVEAE REQYRTSSGE LNSAKQELTN
201: LRQDFDAALT AKLAAFQEAA DAQHNAAINR ERLGKLSKEV TTLRETLGQV KVASLQAQDE HEKLIQDKEV HLQSLKTAKE EAEEKIRALK EDPDSQLVTE
301: NLVEKLEVTN EAIHVLQEQL NNVRALDLDA YNKANEELNA TKNMLKEIVA EESSLRGIVE SLKQEAERVK GELNELNKKA EETESLVEKL KLELENSKKE
401: LETSISAKTQ AEGDSNDLPS RIQQLTSEAN QYTKEANEMK KNTELLKQDA QSAHEATKET EDKLKIALKE AEEAKAAEKL ADEKIHNQSR NNKTDNSTDD
501: NNDEKHSSSE SSNGKIRLSI EEYEALKRKV EGIKNDADIK VATVMAQVET INANEKQANE KLEVLLKEKE DIKIATQEAL KTTEMAEAAK LVVEGELQKW
601: RIKEQEEEEV EIGESSNGNV EET

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.