Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G125200.1 | Wheat | nucleus | 98.74 | 98.74 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 98.11 | 97.8 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 70.03 | 69.48 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 54.42 | 56.28 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 51.89 | 53.41 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 50.0 | 48.77 |
| KRG98464 | Soybean | mitochondrion | 49.84 | 48.39 |
| KRH46399 | Soybean | cytosol | 49.37 | 47.93 |
| Solyc07g065680.2.1 | Tomato | nucleus | 50.16 | 47.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.37 | 46.45 |
| PGSC0003DMT400057359 | Potato | nucleus | 49.37 | 46.37 |
| AT5G55860.1 | Thale cress | nucleus | 45.58 | 44.53 |
| KRH75103 | Soybean | nucleus | 16.72 | 44.17 |
| CDY17364 | Canola | nucleus | 44.48 | 43.19 |
| CDY28631 | Canola | nucleus | 44.32 | 43.1 |
| Bra002870.1-P | Field mustard | nucleus | 44.32 | 43.03 |
| Bra028956.1-P | Field mustard | nucleus | 42.9 | 42.24 |
| KRH73920 | Soybean | nucleus | 43.22 | 42.22 |
| CDY11973 | Canola | nucleus | 42.74 | 42.15 |
| CDY36768 | Canola | nucleus | 42.59 | 41.86 |
| KRH51206 | Soybean | cytosol | 35.02 | 40.36 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 17.98 | 39.31 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 35.65 | 39.17 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 35.17 | 38.72 |
| AT1G12150.2 | Thale cress | cytosol | 33.44 | 38.69 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 34.54 | 38.15 |
| CDY31245 | Canola | cytosol | 32.49 | 37.59 |
| Bra016786.1-P | Field mustard | cytosol | 32.33 | 37.48 |
| CDY21038 | Canola | cytosol | 32.18 | 37.29 |
| PGSC0003DMT400050839 | Potato | nucleus | 35.49 | 36.23 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 25.39 | 35.7 |
| Solyc04g015110.2.1 | Tomato | plastid | 34.86 | 35.47 |
| CDY42964 | Canola | cytosol | 25.71 | 31.35 |
| Bra026233.1-P | Field mustard | cytosol | 25.71 | 31.29 |
| CDX90485 | Canola | cytosol | 25.87 | 30.94 |
| CDY35594 | Canola | nucleus | 25.39 | 30.78 |
| CDY09639 | Canola | cytosol | 25.55 | 30.51 |
| AT4G17210.1 | Thale cress | cytosol, plastid | 25.24 | 30.36 |
| CDY58167 | Canola | cytosol | 24.61 | 30.0 |
| CDY50127 | Canola | cytosol | 24.45 | 29.64 |
| Bra021064.1-P | Field mustard | cytosol | 24.29 | 29.56 |
| CDY15972 | Canola | cytosol | 31.7 | 22.41 |
| Bra026987.1-P | Field mustard | cytosol | 33.28 | 20.91 |
| CDY26542 | Canola | cytosol | 33.28 | 20.91 |
| TraesCS4B01G386100.1 | Wheat | nucleus | 22.08 | 20.71 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 23.34 | 19.37 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 24.29 | 18.31 |
| TraesCS5B01G237000.1 | Wheat | cytosol | 21.61 | 17.36 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 22.56 | 16.53 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G127500.1 | EnsemblPlantsGene:TraesCS4B01G127500 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF3 |
| PFAM:PF05701 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:167344206..167347205
Molecular Weight (calculated)
69930.6 Da
IEP (calculated)
5.000
GRAVY (calculated)
-0.774
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTPHADSEK TGEIDTRAPF ESVKAAVSLF GEVRFSSERS ATRKAQAPQA ERVLAKETEL HLAQKELDKY KEQLSNAETT RLQALSELER AKKSVVDLTN
101: KLDAVTKSKE LNIRATENAN IRTKELEGGS SSEAVGKDGP LKQELDNARE QYAIALADLD AAKQELRKMR KDFETSLDAK LLAAQQEAES VQSSESNKEK
201: ASQLRTEIAM VQESLTHAKA ATEQAREEEA NILAEKDAAR RTCKESLEEA QRKLSNLRND FDPVAFKGLQ EKLDETYSEI ASLQKKIEDA RDRDLESVSA
301: VSTELDDAKE TLQKVAQEQT SLSSLVESLR LELQAVKEEH SQLKHKDAEI ESIVGDLHVK LQKCKSDLET AVATESDATL ASDDLMLALE QLSSESKNAL
401: QEAEVMQKRA AELRDEAEAA RASLVEAEQK LQSSLKEAEV AKAAETRALD QIKQLSEKAS AVRASISEPG ANITISKEEF ESLSRKVEQT EKLAEMKVAA
501: AMAQVDAVRA SENEAIKKLE AARKEIEDME LATEEALKKA ETAEAANKAV ESELKRWREK EEQNKNTETY VPPVGATSLA DAPSHKASYT KANEKSNGHQ
601: KNSKTLLRKS FMLPSITGMF HHKKKNSADG SSHS
101: KLDAVTKSKE LNIRATENAN IRTKELEGGS SSEAVGKDGP LKQELDNARE QYAIALADLD AAKQELRKMR KDFETSLDAK LLAAQQEAES VQSSESNKEK
201: ASQLRTEIAM VQESLTHAKA ATEQAREEEA NILAEKDAAR RTCKESLEEA QRKLSNLRND FDPVAFKGLQ EKLDETYSEI ASLQKKIEDA RDRDLESVSA
301: VSTELDDAKE TLQKVAQEQT SLSSLVESLR LELQAVKEEH SQLKHKDAEI ESIVGDLHVK LQKCKSDLET AVATESDATL ASDDLMLALE QLSSESKNAL
401: QEAEVMQKRA AELRDEAEAA RASLVEAEQK LQSSLKEAEV AKAAETRALD QIKQLSEKAS AVRASISEPG ANITISKEEF ESLSRKVEQT EKLAEMKVAA
501: AMAQVDAVRA SENEAIKKLE AARKEIEDME LATEEALKKA ETAEAANKAV ESELKRWREK EEQNKNTETY VPPVGATSLA DAPSHKASYT KANEKSNGHQ
601: KNSKTLLRKS FMLPSITGMF HHKKKNSADG SSHS
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.