Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17364 | Canola | nucleus | 96.32 | 96.17 |
| AT5G55860.1 | Thale cress | nucleus | 85.74 | 86.13 |
| CDY36768 | Canola | nucleus | 79.75 | 80.62 |
| CDY11973 | Canola | nucleus | 78.37 | 79.47 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 33.9 | 76.21 |
| KRH75103 | Soybean | nucleus | 21.32 | 57.92 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 55.67 | 55.85 |
| KRG98464 | Soybean | mitochondrion | 55.37 | 55.28 |
| KRH46399 | Soybean | cytosol | 54.75 | 54.67 |
| PGSC0003DMT400057359 | Potato | nucleus | 56.29 | 54.37 |
| Solyc07g065680.2.1 | Tomato | nucleus | 55.98 | 54.07 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 46.32 | 49.27 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 45.71 | 48.38 |
| KRH73920 | Soybean | nucleus | 47.09 | 47.3 |
| Os12t0271600-01 | Rice | plasma membrane | 46.78 | 47.14 |
| Zm00001d041088_P004 | Maize | nucleus | 46.32 | 46.53 |
| OQU79020 | Sorghum | nucleus | 46.32 | 46.39 |
| Zm00001d023629_P001 | Maize | nucleus | 44.79 | 44.79 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 43.87 | 44.76 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 44.02 | 44.5 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 43.56 | 44.44 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 43.25 | 44.34 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 43.1 | 44.32 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 42.94 | 44.16 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 42.94 | 43.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.19 | 39.34 |
| CDY21038 | Canola | cytosol | 30.21 | 36.01 |
| CDY31245 | Canola | cytosol | 29.75 | 35.4 |
| CDY50127 | Canola | cytosol | 22.7 | 28.3 |
| CDY58167 | Canola | cytosol | 22.39 | 28.08 |
| CDY35594 | Canola | nucleus | 22.09 | 27.53 |
| CDX90485 | Canola | cytosol | 22.24 | 27.36 |
| CDY42964 | Canola | cytosol | 21.78 | 27.31 |
| CDY09639 | Canola | cytosol | 22.24 | 27.31 |
| CDY15972 | Canola | cytosol | 30.98 | 22.52 |
| CDY48180 | Canola | nucleus | 24.08 | 21.27 |
| CDX77048 | Canola | nucleus | 23.93 | 20.61 |
| CDX72400 | Canola | nucleus | 21.32 | 20.44 |
| CDY46119 | Canola | nucleus | 21.17 | 20.32 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 24.54 | 19.85 |
| CDY22380 | Canola | nucleus | 21.78 | 19.75 |
| CDY26542 | Canola | cytosol | 30.52 | 19.72 |
| CDX71526 | Canola | nucleus | 21.78 | 19.61 |
| CDY17054 | Canola | nucleus | 20.86 | 19.15 |
| CDY43212 | Canola | nucleus | 19.63 | 17.93 |
| CDY62582 | Canola | nucleus | 19.94 | 17.76 |
| CDY17108 | Canola | nucleus | 19.48 | 17.37 |
| CDY35593 | Canola | cytosol | 7.82 | 15.13 |
Protein Annotations
| EnsemblPlants:CDY28631 | EnsemblPlantsGene:GSBRNA2T00040690001 | GO:A0A078GT02 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF3 | PFAM:PF05701 | ProteinID:CDY28631 | ProteinID:CDY28631.1 | SEG:seg | UniParc:UPI0004EE4928 |
| UniProt:A0A078GT02 | MapMan:35.1 | : | : | : | : |
Description
BnaC09g32440DBnaC09g32440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT02]
Coordinates
chrLK032224:-:266547..268570
Molecular Weight (calculated)
72583.5 Da
IEP (calculated)
5.009
GRAVY (calculated)
-0.797
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKKGRRDS SDSSPSVEVG EIDTSSPFQS VKDAVSLFGR EAAFSAEKQP LVRKPSPQSA EKVLVKQTEL HVAQKELNKL KDQLKNAETI REQALSELEW
101: AKRTVDELTR KLDAVNESRD AANKVTEAAK SLIKEAKPGN VSVSSRDDAE GLDMEHYGMV CKELDTAKQE LRKIRQVSNE VSETKNVALT KEEEAKEVTK
201: VYSEKIELLR KEIAAVNESV EQTKLACSQA QKEQSKIFAE KEIQHQSYKA GMEESAKKLL ALKSEFDPEF AKKLEAQLTE TYNEIDELQK QMETAKASDT
301: ESVNGVSLEL KEAKGLLEKL VEEEKSLEKS VESLKAELEN VKTERSEVEA KEAEIETVAG DLNLKLSQSK SELEECVAEE GKANAALEDM MSTLNQITSE
401: TEAARREADA MRNKAEELKK EAETAHLALE ETELNLRVAL DEAEEAKTTE AKALGQIKSM SEKTNAVRNS TSSESGPQSI TLSRDEFKSL SKRAEVSDKL
501: ADMKVAAALA QVEAVRASEN ETLKKLETTQ EEIEKLKTAT EEALKKAAMA DAAKKAVEGE LRRWRERDQK KAEEAASRIL AEAEARMSVE SSPQHLYYKD
601: TKQKPVYKKL EKTRTSVVSK KVLMPNLSGI FSRKKNQAEW GSPSYLPGEK PF
101: AKRTVDELTR KLDAVNESRD AANKVTEAAK SLIKEAKPGN VSVSSRDDAE GLDMEHYGMV CKELDTAKQE LRKIRQVSNE VSETKNVALT KEEEAKEVTK
201: VYSEKIELLR KEIAAVNESV EQTKLACSQA QKEQSKIFAE KEIQHQSYKA GMEESAKKLL ALKSEFDPEF AKKLEAQLTE TYNEIDELQK QMETAKASDT
301: ESVNGVSLEL KEAKGLLEKL VEEEKSLEKS VESLKAELEN VKTERSEVEA KEAEIETVAG DLNLKLSQSK SELEECVAEE GKANAALEDM MSTLNQITSE
401: TEAARREADA MRNKAEELKK EAETAHLALE ETELNLRVAL DEAEEAKTTE AKALGQIKSM SEKTNAVRNS TSSESGPQSI TLSRDEFKSL SKRAEVSDKL
501: ADMKVAAALA QVEAVRASEN ETLKKLETTQ EEIEKLKTAT EEALKKAAMA DAAKKAVEGE LRRWRERDQK KAEEAASRIL AEAEARMSVE SSPQHLYYKD
601: TKQKPVYKKL EKTRTSVVSK KVLMPNLSGI FSRKKNQAEW GSPSYLPGEK PF
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.