Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43212 | Canola | nucleus | 88.59 | 88.1 |
| Bra014049.1-P | Field mustard | nucleus | 92.54 | 87.14 |
| CDY17108 | Canola | nucleus | 71.69 | 69.63 |
| AT1G45545.2 | Thale cress | nucleus | 69.3 | 65.34 |
| CDY62582 | Canola | nucleus | 65.92 | 63.93 |
| CDY22380 | Canola | nucleus | 50.0 | 49.37 |
| CDX71526 | Canola | nucleus | 50.28 | 49.31 |
| Solyc05g042150.1.1 | Tomato | cytosol | 12.96 | 47.92 |
| Solyc07g026880.1.1 | Tomato | cytosol | 9.01 | 41.56 |
| CDY48180 | Canola | nucleus | 41.97 | 40.38 |
| CDX77048 | Canola | nucleus | 42.96 | 40.29 |
| CDY46119 | Canola | nucleus | 37.32 | 39.03 |
| CDX72400 | Canola | nucleus | 36.9 | 38.53 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 42.11 | 37.1 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 42.25 | 35.55 |
| KRH07566 | Soybean | nucleus | 30.7 | 35.45 |
| Solyc07g022910.2.1 | Tomato | plastid | 41.97 | 35.18 |
| Solyc04g078950.1.1 | Tomato | nucleus | 15.07 | 35.08 |
| PGSC0003DMT400039921 | Potato | nucleus | 41.55 | 34.46 |
| Solyc12g088830.1.1 | Tomato | nucleus | 40.14 | 33.81 |
| KRH45361 | Soybean | nucleus | 27.46 | 33.28 |
| PGSC0003DMT400011385 | Potato | nucleus | 42.25 | 33.22 |
| Os03t0395300-01 | Rice | plasma membrane | 35.49 | 32.47 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 39.86 | 32.27 |
| Solyc08g015840.1.1 | Tomato | cytosol | 8.87 | 32.14 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 32.11 | 31.8 |
| KRH51982 | Soybean | nucleus | 41.83 | 31.16 |
| Zm00001d029420_P002 | Maize | nucleus | 34.08 | 30.87 |
| PGSC0003DMT400020677 | Potato | nucleus | 41.83 | 30.62 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 33.52 | 30.51 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 32.82 | 30.5 |
| Zm00001d047240_P002 | Maize | nucleus | 33.38 | 30.19 |
| GSMUA_Achr10P... | Banana | cytosol | 34.65 | 30.18 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 33.66 | 30.14 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 33.66 | 30.14 |
| Os07t0619100-01 | Rice | plasma membrane | 34.65 | 30.11 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 34.51 | 29.81 |
| KRH61284 | Soybean | nucleus | 40.56 | 29.6 |
| EER92167 | Sorghum | nucleus | 32.68 | 29.59 |
| Zm00001d022161_P001 | Maize | nucleus | 33.1 | 29.38 |
| KXG36701 | Sorghum | nucleus | 33.8 | 29.09 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 34.37 | 29.01 |
| KRH15355 | Soybean | nucleus | 41.13 | 28.91 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 34.08 | 28.78 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 33.1 | 28.66 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 25.21 | 28.5 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 33.66 | 26.44 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 29.86 | 24.51 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 16.62 | 23.32 |
| CDY28631 | Canola | nucleus | 19.15 | 20.86 |
| CDY17364 | Canola | nucleus | 19.01 | 20.67 |
| CDY36768 | Canola | nucleus | 18.59 | 20.47 |
| CDY42964 | Canola | cytosol | 14.93 | 20.38 |
| CDY11973 | Canola | nucleus | 18.31 | 20.22 |
| CDY58167 | Canola | cytosol | 14.79 | 20.19 |
| CDY31245 | Canola | cytosol | 15.49 | 20.07 |
| CDY35594 | Canola | nucleus | 14.65 | 19.89 |
| CDY50127 | Canola | cytosol | 14.51 | 19.69 |
| CDX90485 | Canola | cytosol | 14.51 | 19.43 |
| CDY21038 | Canola | cytosol | 14.93 | 19.38 |
| CDY09639 | Canola | cytosol | 14.23 | 19.02 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 6.9 | 16.9 |
| CDY15972 | Canola | cytosol | 17.32 | 13.71 |
| CDY26542 | Canola | cytosol | 16.76 | 11.79 |
| CDY35593 | Canola | cytosol | 4.79 | 10.09 |
Protein Annotations
| EnsemblPlants:CDY17054 | EnsemblPlantsGene:GSBRNA2T00095035001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | ProteinID:CDY17054 | ProteinID:CDY17054.1 | SEG:seg | UniParc:UPI0004EEA8EB | UniProt:A0A078FVG8 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA08g04180DBnaA08g04180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVG8]
Coordinates
chrLK032069:+:626768..629100
Molecular Weight (calculated)
79849.8 Da
IEP (calculated)
4.838
GRAVY (calculated)
-0.810
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDDDKVSND FSLLPDLNDD SSTPFNNSLE FDSSILDLLT MEDGRETPNL FPDHNPFLES LHAPPQEDQH IFAEAESPKV YIAPRVMVNH EDSFSLDSRI
101: DSIEDARIIS LPDSPRGSQD VGLSRLRVPG SPRAFVHPRT SGSPRFGSPT SPVLIDTTAP FESVKDAVSK FGGITDWKAH KIQTIERRKT VDQDLEKIQE
201: DMPEYKKQAV VAEEAKEQVV MELERTRSIV EKLKLELEKA EKEEQQAQQD SDLAKLRVEE MEQGIADDSS VAAKAQIQVA KERHSSAVSE LRNLREEIKM
301: VTKDVEKQMT DLTIEVIATK QLLESAQAAH LEAEEKKFDA AMARDQDLYN REKELRMVEE EIERLRQEIH AADDVKIKLE TASVLQQDLR AEIPAYKDSN
401: DKRNNSDIQA AVDSARKELE EVKSNIEKAN SEVKTLKIIV GSLQSELERE KKDLSETKHR EALSVQRDGE EMREEGCKEI ASMLQEAKKE TDEANSLALA
501: AREALRKAKE EEMEAAKASE KLALAAIKAL QETECGKKIE DVSSSPRSII ISVEEYYELS KKAHEVEEAA NRKLSEIVSQ IEAAKEEESR VLEKLEEVSR
601: ETALQKEKLK EAMGKVEKAR DGKVGMDHEL RKWSSEKSPK TSPEGGEKEN HDLGKSKSAL HSATSFAFGE QGSSNVGDSN NVTPETKKKK KKFSLLPKVF
701: MFLSRKKSNK
101: DSIEDARIIS LPDSPRGSQD VGLSRLRVPG SPRAFVHPRT SGSPRFGSPT SPVLIDTTAP FESVKDAVSK FGGITDWKAH KIQTIERRKT VDQDLEKIQE
201: DMPEYKKQAV VAEEAKEQVV MELERTRSIV EKLKLELEKA EKEEQQAQQD SDLAKLRVEE MEQGIADDSS VAAKAQIQVA KERHSSAVSE LRNLREEIKM
301: VTKDVEKQMT DLTIEVIATK QLLESAQAAH LEAEEKKFDA AMARDQDLYN REKELRMVEE EIERLRQEIH AADDVKIKLE TASVLQQDLR AEIPAYKDSN
401: DKRNNSDIQA AVDSARKELE EVKSNIEKAN SEVKTLKIIV GSLQSELERE KKDLSETKHR EALSVQRDGE EMREEGCKEI ASMLQEAKKE TDEANSLALA
501: AREALRKAKE EEMEAAKASE KLALAAIKAL QETECGKKIE DVSSSPRSII ISVEEYYELS KKAHEVEEAA NRKLSEIVSQ IEAAKEEESR VLEKLEEVSR
601: ETALQKEKLK EAMGKVEKAR DGKVGMDHEL RKWSSEKSPK TSPEGGEKEN HDLGKSKSAL HSATSFAFGE QGSSNVGDSN NVTPETKKKK KKFSLLPKVF
701: MFLSRKKSNK
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.