CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021064.1-P	Field mustard	cytosol	91.15	90.98
CDY50127	Canola	cytosol	90.19	89.67
CDY42964	Canola	cytosol	74.23	74.23
CDY09639	Canola	cytosol	75.77	74.2
CDX90485	Canola	cytosol	75.58	74.15
CDY35594	Canola	nucleus	73.27	72.85
AT4G17210.1	Thale cress	cytosol, plastid	72.88	71.92
CDY21038	Canola	cytosol	38.65	36.75
CDY31245	Canola	cytosol	37.12	35.22
KRH51206	Soybean	cytosol	32.88	31.09
KRH36620	Soybean	cytosol, mitochondrion, nucleus	33.85	30.5
KRH01945	Soybean	cytosol, mitochondrion, nucleus	33.27	30.14
KRH11615	Soybean	cytosol, mitochondrion, nucleus	33.08	29.86
CDY11974	Canola	cytosol, nucleus, plastid	15.19	27.24
OQU79020	Sorghum	nucleus	31.92	25.5
GSMUA_Achr7P16580_001	Banana	cytosol	30.19	25.49
Os12t0271600-01	Rice	plasma membrane	31.54	25.35
PGSC0003DMT400034621	Potato	mitochondrion, plastid	21.92	25.28
Zm00001d023629_P001	Maize	nucleus	31.54	25.15
GSMUA_Achr4P18510_001	Banana	nucleus	29.62	25.12
Zm00001d041088_P004	Maize	nucleus	30.96	24.81
TraesCS4A01G188200.1	Wheat	nucleus	30.19	24.69
TraesCS4D01G125200.1	Wheat	nucleus	30.0	24.61
TraesCS4B01G127500.1	Wheat	nucleus	30.0	24.61
Solyc04g015110.2.1	Tomato	plastid	28.65	23.92
PGSC0003DMT400050839	Potato	nucleus	28.46	23.83
TraesCS5B01G103500.1	Wheat	nucleus	29.23	23.79
TraesCS5A01G098800.2	Wheat	cytosol	29.04	23.63
HORVU5Hr1G029890.1	Barley	nucleus	29.23	23.57
TraesCS5D01G110400.2	Wheat	cytosol	28.65	23.32
CDY17364	Canola	nucleus	28.85	22.97
CDY36768	Canola	nucleus	28.27	22.79
CDY28631	Canola	nucleus	28.08	22.39
CDY11973	Canola	nucleus	27.12	21.93
GSMUA_AchrUn_...	Banana	nucleus	25.96	21.33
CDY15972	Canola	cytosol	36.15	20.96
CDY26542	Canola	cytosol	35.38	18.24
CDY22380	Canola	nucleus	21.54	15.58
CDX71526	Canola	nucleus	21.54	15.47
CDY48180	Canola	nucleus	21.15	14.91
CDY43212	Canola	nucleus	20.38	14.85
CDY17054	Canola	nucleus	20.19	14.79
CDY46119	Canola	nucleus	18.85	14.43
CDX72400	Canola	nucleus	18.85	14.41
CDX77048	Canola	nucleus	20.96	14.4
CDY62582	Canola	nucleus	20.19	14.34
CDY17108	Canola	nucleus	20.0	14.23
CDX68971	Canola	mitochondrion, nucleus, plastid	21.73	14.02
CDY35593	Canola	cytosol	6.54	10.09

Protein Annotations

EnsemblPlants:CDY58167	EnsemblPlantsGene:GSBRNA2T00023183001	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF20
PFAM:PF05701	ProteinID:CDY58167	ProteinID:CDY58167.1	SEG:seg	UniParc:UPI0004EEC572	UniProt:A0A078J5R7
MapMan:35.1	:	:	:	:	:

Description

BnaA08g30230DBnaA08g30230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5R7]

Coordinates

chrLK033642:-:18647..20295

Molecular Weight (calculated)

59986.1 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.869

Length

520 amino acids

Sequence
(BLAST)

001: MAKIRADAPV ETPPRMSEVG EIDTRPPFQS VRDAVSLFRQ ASFSKQQQPR LSSLSSQDTT DVSEKETQLL LAEQEMDRVQ LCLDTSVKAK ARALSALDSA
101: QRKAFDLRAK LEATKQSKKS AILTKHTMNQ RLEKLQSQNQ ETERARENYI LATAELLMAK QKLAEIKQEF SISVEERLSE LQRADEAECA TVVNSQKIRD
201: MTHEIAEMCD AAERLKSGAD RIQKEEEKIN EERMDMGKTY GDMKREAELR LEDLRRGCDP ELRKDIDELE EISAENELLQ EEIKLAMELK EAKSAMREIF
301: DEEISYRSLV GSLTVELDGV QRENRDLKGK ENEREAFEEV EWVEASRKVD EIISEAERTR QEAEEMRMQV DELRRETSGR RTVMGEAVKQ LEIVGRAVAK
401: AKTAEKRAVE DMRVLTDKKE SLTHNEPDKK IRISLKEYEE LRGKHEESER MVQYKAKTVA VQLEEIKESR VEGEMMLEEK MKEMEEVEEA IDSALRNAEI
501: AEEAHCIVDA ELRKWKPQEL

Best Arabidopsis Sequence Match ( AT4G17210.1 )
(BLAST)

001: MAKIRTDAPV MPPETPPRSS EVGEIDTRAP FQSVRDALSL FRQVSFSKKQ PPRLSSSSSS QSQDTTTDVS DKEMQLLLAE QEMDRVKICL DGSVAAKAQA
101: LSDLDSAQRK AADLRVKLES IKHSRKCAIS TKHTMNQRLE QLQSENQETE STREDYILIT AELFMAKYEL AELKQQFNLS VEERLAELQR AEEAECASMV
201: NSNKIKDMSH DIAEMRDAAE RLNSDAARKK EEEEQIKEES IALRETYVCK KLEAKQRLED LKRDCDPELK KDIEELMEIS TENERLQEEI KLSGELKEAK
301: SAMQEIYDEE SSYKSLVGSL TVELDGVQRE NRELKGKEKE RQEAEEGEWV EASRKVDEIM REAEKTRKEA EEMRMNVDEL RREAAAKHMV MGEAVKQLEI
401: VGRAVEKAKT AEKRAVEDMK VLTEKKESLT HDEPDKKIRI SLKEYEELRG KHEESERMVQ FKAKTVAAQL EEINESRIEG ERKLEEKIKE MEELKAAIDG
501: ALRKAEIAEE AHSIVDAELR KWKPQDL

Arabidopsis Description

Putative WEB family protein At4g17210 [Source:UniProtKB/Swiss-Prot;Acc:O23564]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.