Factsheet for Zm00001d041088_P004

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79020	Sorghum	nucleus	94.3	94.01
Zm00001d023629_P001	Maize	nucleus	89.21	88.8
Os12t0271600-01	Rice	plasma membrane	82.13	82.38
TraesCS5B01G103500.1	Wheat	nucleus	75.35	76.53
TraesCS5A01G098800.2	Wheat	cytosol	75.35	76.53
HORVU5Hr1G029890.1	Barley	nucleus	75.35	75.81
TraesCS5D01G110400.2	Wheat	cytosol	73.65	74.8
GSMUA_Achr4P18510_001	Banana	nucleus	56.7	60.03
GSMUA_Achr7P16580_001	Banana	cytosol	53.62	56.49
VIT_19s0015g00740.t01	Wine grape	nucleus	51.77	51.69
KRG98464	Soybean	mitochondrion	51.62	51.3
KRH46399	Soybean	cytosol	51.62	51.3
Solyc07g065680.2.1	Tomato	nucleus	50.69	48.74
PGSC0003DMT400057359	Potato	nucleus	50.08	48.15
GSMUA_AchrUn_...	Banana	nucleus	46.84	48.03
CDY28631	Canola	nucleus	46.53	46.32
Bra002870.1-P	Field mustard	nucleus	46.53	46.25
CDY17364	Canola	nucleus	46.38	46.09
AT5G55860.1	Thale cress	nucleus	46.07	46.07
KRH75103	Soybean	nucleus	16.95	45.83
KRH73920	Soybean	nucleus	45.15	45.15
CDY11973	Canola	nucleus	43.91	44.32
Bra028956.1-P	Field mustard	nucleus	43.76	44.1
CDY36768	Canola	nucleus	43.76	44.03
KRH11615	Soybean	cytosol, mitochondrion, nucleus	36.52	41.15
CDY11974	Canola	cytosol, nucleus, plastid	18.18	40.69
KRH36620	Soybean	cytosol, mitochondrion, nucleus	35.9	40.38
KRH51206	Soybean	cytosol	33.74	39.82
PGSC0003DMT400050839	Potato	nucleus	37.6	39.29
KRH01945	Soybean	cytosol, mitochondrion, nucleus	34.36	38.85
Solyc04g015110.2.1	Tomato	plastid	37.13	38.68
AT1G12150.2	Thale cress	cytosol	32.05	37.96
CDY31245	Canola	cytosol	31.74	37.59
PGSC0003DMT400034621	Potato	mitochondrion, plastid	25.89	37.25
Bra016786.1-P	Field mustard	cytosol	30.97	36.75
CDY21038	Canola	cytosol	30.82	36.56
CDY35594	Canola	nucleus	25.42	31.55
Bra026233.1-P	Field mustard	cytosol	25.27	31.48
CDY42964	Canola	cytosol	25.12	31.35
CDY58167	Canola	cytosol	24.81	30.96
CDX90485	Canola	cytosol	24.96	30.57
CDY50127	Canola	cytosol	24.5	30.4
Bra021064.1-P	Field mustard	cytosol	24.35	30.33
CDY09639	Canola	cytosol	24.81	30.32
AT4G17210.1	Thale cress	cytosol, plastid	24.5	30.17
Zm00001d048523_P001	Maize	nucleus	22.19	23.08
CDY15972	Canola	cytosol	31.43	22.74
Zm00001d027322_P001	Maize	cytosol	22.5	20.74
Bra026987.1-P	Field mustard	cytosol	31.43	20.22
CDY26542	Canola	cytosol	31.28	20.12
Zm00001d029420_P002	Maize	nucleus	23.27	19.26
Zm00001d022161_P001	Maize	nucleus	23.42	19.0
Zm00001d047240_P002	Maize	nucleus	22.96	18.98
Zm00001d005893_P001	Maize	cytosol	20.49	17.5
Zm00001d020719_P002	Maize	nucleus	20.03	16.52
Zm00001d014236_P001	Maize	nucleus	8.63	10.89

Protein Annotations

EnsemblPlants:Zm00001d041088_P004	EnsemblPlants:Zm00001d041088_T004	EnsemblPlantsGene:Zm00001d041088	EntrezGene:100501212	InterPro:Web	ncoils:Coil
PANTHER:PTHR32054	PANTHER:PTHR32054:SF3	PFAM:PF05701	ProteinID:ONM32384.1	SEG:seg	UniParc:UPI0008444443
UniProt:A0A1D6MU25	MapMan:35.1	:	:	:	:

Description

WEB family protein

Coordinates

chr3:+:96602607..96606539

Molecular Weight (calculated)

71524.4 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.757

Length

649 amino acids

Sequence
(BLAST)

001: MKANMGTKAR PPSADAEKGE IGEIDTRAPI QSVKAAVSLF GEVRFSSDKS AERKPKAPQT QRVLAKETEL HMAQKELNKY KEQLSNAETT RVQALSELEK
101: AKKTVEELTA KLDLINKSKQ LAIQATEDAK TQIKQLEGGS TSEGLGTDGA LKQELESARE QYAVALADLD AAKQELRKLK KDFETSLDMR LSAAQQEEES
201: LHTTEANIEK ANQLRSEIAE IQESLMHVKA ATVQAHEEEA QILAEKDVAR TTYKQALEET QKKLLSLRND FDPAAYDSLK QKLEQTNSEI ASMQKKIEEA
301: RARDLESVAV VSTELDDAKE MLQKVAEEKS SLRSLVESLK VELEAVKQEH NQLKEKDTET ESIVGDLHVK LQKCKSELEA AVAAESKAMS ASDDLMLALQ
401: QLSSESKNAL QEAEMMEKSA AELREEGEKA RVELAEAEQK MQLALKEAEE AKAAEARALD QIKQLSDRAS AARSSTSESG AIITISKEEF VSLSRKVEES
501: EKLSDMKVAA AMAQVEAIRA SENEAIKKLE TARKEMEDME LATEEALKRA EMAEAAKKAV EGELKRWREK EKKTAEAQPS AGAEELGSGS PPVPQTSAGK
601: ASEKNDGHRN SRTLLRRSFM LPNITSMFHK KKNQPGSSSP SYLPGEKSV

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.