Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G098800.2 | Wheat | cytosol | 97.03 | 97.03 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 93.43 | 92.56 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 91.71 | 91.71 |
| Os12t0271600-01 | Rice | plasma membrane | 79.66 | 78.67 |
| OQU79020 | Sorghum | nucleus | 79.34 | 77.88 |
| Zm00001d041088_P004 | Maize | nucleus | 76.53 | 75.35 |
| Zm00001d023629_P001 | Maize | nucleus | 75.27 | 73.77 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 69.48 | 70.03 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 53.99 | 56.28 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 51.49 | 53.41 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 48.2 | 47.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.17 | 46.6 |
| KRG98464 | Soybean | mitochondrion | 47.42 | 46.4 |
| KRH46399 | Soybean | cytosol | 46.95 | 45.94 |
| PGSC0003DMT400057359 | Potato | nucleus | 47.1 | 44.59 |
| Solyc07g065680.2.1 | Tomato | nucleus | 46.95 | 44.44 |
| AT5G55860.1 | Thale cress | nucleus | 44.6 | 43.91 |
| CDY28631 | Canola | nucleus | 44.76 | 43.87 |
| Bra002870.1-P | Field mustard | nucleus | 44.44 | 43.49 |
| CDY17364 | Canola | nucleus | 44.29 | 43.34 |
| KRH75103 | Soybean | nucleus | 15.96 | 42.5 |
| Bra028956.1-P | Field mustard | nucleus | 42.41 | 42.08 |
| CDY36768 | Canola | nucleus | 42.41 | 42.02 |
| KRH73920 | Soybean | nucleus | 42.57 | 41.91 |
| CDY11973 | Canola | nucleus | 42.1 | 41.84 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 18.31 | 40.34 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 35.68 | 39.58 |
| KRH51206 | Soybean | cytosol | 33.33 | 38.73 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 34.9 | 38.65 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 33.18 | 36.93 |
| AT1G12150.2 | Thale cress | cytosol | 31.61 | 36.86 |
| CDY31245 | Canola | cytosol | 31.61 | 36.86 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 25.98 | 36.81 |
| Bra016786.1-P | Field mustard | cytosol | 31.46 | 36.75 |
| CDY21038 | Canola | cytosol | 31.3 | 36.56 |
| PGSC0003DMT400050839 | Potato | nucleus | 35.05 | 36.07 |
| Solyc04g015110.2.1 | Tomato | plastid | 35.05 | 35.96 |
| CDY42964 | Canola | cytosol | 24.1 | 29.62 |
| CDY35594 | Canola | nucleus | 24.1 | 29.45 |
| Bra026233.1-P | Field mustard | cytosol | 23.94 | 29.37 |
| CDX90485 | Canola | cytosol | 24.26 | 29.25 |
| CDY58167 | Canola | cytosol | 23.79 | 29.23 |
| CDY09639 | Canola | cytosol | 24.1 | 29.0 |
| CDY50127 | Canola | cytosol | 23.32 | 28.49 |
| AT4G17210.1 | Thale cress | cytosol, plastid | 23.16 | 28.08 |
| Bra021064.1-P | Field mustard | cytosol | 22.85 | 28.02 |
| CDY15972 | Canola | cytosol | 31.14 | 22.19 |
| TraesCS4B01G386100.1 | Wheat | nucleus | 22.07 | 20.86 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 24.26 | 20.29 |
| Bra026987.1-P | Field mustard | cytosol | 31.14 | 19.72 |
| CDY26542 | Canola | cytosol | 30.99 | 19.62 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 25.04 | 19.02 |
| TraesCS5B01G237000.1 | Wheat | cytosol | 20.97 | 16.98 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 20.97 | 15.49 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G103500.1 | EnsemblPlantsGene:TraesCS5B01G103500 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF3 |
| PFAM:PF05701 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:137993576..137997384
Molecular Weight (calculated)
70675.5 Da
IEP (calculated)
5.297
GRAVY (calculated)
-0.758
Length
639 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKVRPPST DAEKLEVGEI DTRAPFESVK AAVSLFGEVR FSSDKSAARK PKAPQAEQKV LAKETELHLA QKELNKYREQ LSNAETARLQ SLSELEKARK
101: TVDELTTKLD AINKSKEMAI QATEDTKTRT KQLEGGSPKE AVRKDSPLKQ ELDSARQQYA VALADLDAAK QELRKLKKDF ETSLDMRLSA AQKEEESLHS
201: IEANKEKAAQ LRNEAKAIQE SLMHMKAATE QLQEEDSQVL VEKDIASNTY KQALEETEKK LSYLRNEFDP TAYKTLKEKL DETNSEISSM QKKIEDARAL
301: DLETVAAITT ELDDAKEMLQ KVAEEESTLR NLVESLKLEL AAVKQDHSQL KEKDTDTESI VADLHVKLQK CKSELEVAVC AESEAAAASD DLMLALQQLS
401: CESKTALQEA EMMQKSAAEL RIEAEAARVA LTEAEERLQS ALKEAEEAKA AEAKALDQIK QLSDRASAVQ ASTSEPGGKV TISKAEFESL SRKVKESEKL
501: SEMKVAAAMA QVEAVRASEN EAIQKMKTAR REMEDMELAT EEALKRAEMA EAAKKAVEGE LKRWREKEQK KAAESVSSAE AQAHAATPSS VHKAPAGKPT
601: EKNDGHQRSN RMLLRKGFVL PNITGMFHKK KGHADGSSP
101: TVDELTTKLD AINKSKEMAI QATEDTKTRT KQLEGGSPKE AVRKDSPLKQ ELDSARQQYA VALADLDAAK QELRKLKKDF ETSLDMRLSA AQKEEESLHS
201: IEANKEKAAQ LRNEAKAIQE SLMHMKAATE QLQEEDSQVL VEKDIASNTY KQALEETEKK LSYLRNEFDP TAYKTLKEKL DETNSEISSM QKKIEDARAL
301: DLETVAAITT ELDDAKEMLQ KVAEEESTLR NLVESLKLEL AAVKQDHSQL KEKDTDTESI VADLHVKLQK CKSELEVAVC AESEAAAASD DLMLALQQLS
401: CESKTALQEA EMMQKSAAEL RIEAEAARVA LTEAEERLQS ALKEAEEAKA AEAKALDQIK QLSDRASAVQ ASTSEPGGKV TISKAEFESL SRKVKESEKL
501: SEMKVAAAMA QVEAVRASEN EAIQKMKTAR REMEDMELAT EEALKRAEMA EAAKKAVEGE LKRWREKEQK KAAESVSSAE AQAHAATPSS VHKAPAGKPT
601: EKNDGHQRSN RMLLRKGFVL PNITGMFHKK KGHADGSSP
001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
Arabidopsis Description
WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.