CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041088_P004	Maize	nucleus	94.01	94.3
Zm00001d023629_P001	Maize	nucleus	92.32	92.18
Os12t0271600-01	Rice	plasma membrane	84.79	85.32
TraesCS5B01G103500.1	Wheat	nucleus	77.88	79.34
TraesCS5A01G098800.2	Wheat	cytosol	77.88	79.34
HORVU5Hr1G029890.1	Barley	nucleus	78.03	78.76
TraesCS5D01G110400.2	Wheat	cytosol	75.88	77.31
GSMUA_Achr4P18510_001	Banana	nucleus	58.68	62.32
GSMUA_Achr7P16580_001	Banana	cytosol	55.3	58.44
VIT_19s0015g00740.t01	Wine grape	nucleus	52.84	52.92
KRH46399	Soybean	cytosol	51.61	51.45
KRG98464	Soybean	mitochondrion	51.46	51.3
GSMUA_AchrUn_...	Banana	nucleus	48.69	50.08
Solyc07g065680.2.1	Tomato	nucleus	51.15	49.33
PGSC0003DMT400057359	Potato	nucleus	50.84	49.04
Bra002870.1-P	Field mustard	nucleus	46.54	46.4
CDY28631	Canola	nucleus	46.39	46.32
CDY17364	Canola	nucleus	46.39	46.25
AT5G55860.1	Thale cress	nucleus	46.08	46.23
KRH73920	Soybean	nucleus	45.47	45.61
KRH75103	Soybean	nucleus	16.74	45.42
CDY11973	Canola	nucleus	44.24	44.79
Bra028956.1-P	Field mustard	nucleus	43.93	44.41
CDY36768	Canola	nucleus	43.93	44.34
KRH11615	Soybean	cytosol, mitochondrion, nucleus	36.87	41.67
KRH36620	Soybean	cytosol, mitochondrion, nucleus	36.25	40.9
KRH51206	Soybean	cytosol	34.1	40.36
CDY11974	Canola	cytosol, nucleus, plastid	17.97	40.34
PGSC0003DMT400050839	Potato	nucleus	38.25	40.1
AT1G12150.2	Thale cress	cytosol	33.49	39.78
Solyc04g015110.2.1	Tomato	plastid	37.94	39.65
CDY31245	Canola	cytosol	33.03	39.23
KRH01945	Soybean	cytosol, mitochondrion, nucleus	34.56	39.2
Bra016786.1-P	Field mustard	cytosol	32.57	38.76
CDY21038	Canola	cytosol	32.41	38.57
PGSC0003DMT400034621	Potato	mitochondrion, plastid	26.27	37.92
Bra026233.1-P	Field mustard	cytosol	26.27	32.82
CDY35594	Canola	nucleus	26.27	32.7
CDY42964	Canola	cytosol	26.11	32.69
CDY58167	Canola	cytosol	25.5	31.92
CDX90485	Canola	cytosol	25.65	31.51
AT4G17210.1	Thale cress	cytosol, plastid	25.5	31.5
CDY50127	Canola	cytosol	25.19	31.36
Bra021064.1-P	Field mustard	cytosol	25.04	31.29
CDY09639	Canola	cytosol	25.5	31.26
CDY15972	Canola	cytosol	32.72	23.75
OQU93419	Sorghum	cytosol	22.73	21.7
Bra026987.1-P	Field mustard	cytosol	32.57	21.01
CDY26542	Canola	cytosol	32.1	20.71
EER92167	Sorghum	nucleus	23.35	19.39
KXG36701	Sorghum	nucleus	24.27	19.15
KXG35766	Sorghum	nucleus	21.51	17.46

Protein Annotations

MapMan:35.1	EntrezGene:8155421	UniProt:C6JRM9	ncoils:Coil	ProteinID:EES20175.1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	ProteinID:KXG19014.1	EnsemblPlants:OQU79020	ProteinID:OQU79020
ProteinID:OQU79020.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF3	EnsemblPlantsGene:SORBI_3008G088824	UniParc:UPI0001AFF838
InterPro:Web	RefSeq:XP_002489281.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:20353198..20358023

Molecular Weight (calculated)

71799.4 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.789

Length

651 amino acids

Sequence
(BLAST)

001: MKANMGTKPR PPSADVEKGE IGEIDTRAPF ESVKAAVSLF GEVRFSSDKS AARKPKAPQA ERVLAKETEL HLAQKELNKY KEQLSNAETT RVQALSELEK
101: AKKTVEELTT KLDVINKSKQ LAIQATEDAK TRTKQLEGGS TNEGLGTDGP LKQELESARE QYAVALADLD AAKQELRKLK KDFETSLDMR LSAAQQEEES
201: LHTTEANKEK ANQLRSEIAE IQESLMHVKA ATVQAHEEEA QILAEKDVAR TTYKQALEET QKKLSSLRSD FDPAAYDSLK EKLEQTNSEI ASMQKKIEDA
301: RARDLESVAV VSTELDDAKE MLQKVAEEES SLRSLVESLK VELEAVKQEH NQLKEKDTET ESIVGDLHVK LQKCKSELEA AVAAESKATS ASDDLMLALQ
401: QLSSESKNAL QEAEMMQKSA AELREEAEKA RVELAEAEQK LQLALKEAEE AKAAEARALD EIKQLSDRAS AARASTSESG ANITISKEEF ESLSRKVEES
501: EKLSEMKVAA AMAQVEAIRA SENEAIKKLE AARKEMEEME LATEEALKRA EMAEAAKKAV EGELKRWREK EQKKTAEAHP LAGAEELGSA SPSVPQTSAG
601: KASEKNDGHQ RNSRTLLRRS FMLPNITSMF HKKKSHPGSS SPSYLPGEKS V

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.