Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18510_001 | Banana | nucleus | 59.72 | 61.66 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 54.34 | 55.84 |
| Os12t0271600-01 | Rice | plasma membrane | 51.18 | 50.08 |
| OQU79020 | Sorghum | nucleus | 50.08 | 48.69 |
| Zm00001d023629_P001 | Maize | nucleus | 49.13 | 47.7 |
| Zm00001d041088_P004 | Maize | nucleus | 48.03 | 46.84 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 46.76 | 46.69 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 46.45 | 46.37 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 46.45 | 46.23 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 46.6 | 46.17 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 46.92 | 46.05 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 46.29 | 45.85 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 45.97 | 45.54 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 45.81 | 44.62 |
| KRG98464 | Soybean | mitochondrion | 42.5 | 41.19 |
| KRH46399 | Soybean | cytosol | 42.34 | 41.04 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 18.64 | 40.69 |
| PGSC0003DMT400057359 | Potato | nucleus | 42.5 | 39.85 |
| Solyc07g065680.2.1 | Tomato | nucleus | 42.02 | 39.41 |
| CDY28631 | Canola | nucleus | 39.34 | 38.19 |
| CDY36768 | Canola | nucleus | 38.86 | 38.14 |
| CDY11973 | Canola | nucleus | 38.7 | 38.1 |
| Bra002870.1-P | Field mustard | nucleus | 39.18 | 37.98 |
| CDY17364 | Canola | nucleus | 39.02 | 37.83 |
| KRH75103 | Soybean | nucleus | 14.22 | 37.5 |
| AT5G55860.1 | Thale cress | nucleus | 38.23 | 37.29 |
| KRH73920 | Soybean | nucleus | 37.76 | 36.83 |
| Bra028956.1-P | Field mustard | nucleus | 37.28 | 36.65 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 33.02 | 36.22 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 32.7 | 35.94 |
| KRH51206 | Soybean | cytosol | 30.02 | 34.55 |
| Solyc04g015110.2.1 | Tomato | plastid | 33.33 | 33.87 |
| PGSC0003DMT400050839 | Potato | nucleus | 33.02 | 33.66 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 30.17 | 33.28 |
| AT1G12150.2 | Thale cress | cytosol | 28.75 | 33.21 |
| CDY31245 | Canola | cytosol | 28.28 | 32.66 |
| CDY21038 | Canola | cytosol | 27.96 | 32.36 |
| Bra016786.1-P | Field mustard | cytosol | 27.8 | 32.18 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 21.48 | 30.16 |
| CDY58167 | Canola | cytosol | 21.33 | 25.96 |
| CDY09639 | Canola | cytosol | 21.48 | 25.61 |
| CDY42964 | Canola | cytosol | 21.01 | 25.58 |
| Bra026233.1-P | Field mustard | cytosol | 21.01 | 25.53 |
| Bra021064.1-P | Field mustard | cytosol | 21.01 | 25.53 |
| CDX90485 | Canola | cytosol | 21.33 | 25.47 |
| CDY50127 | Canola | cytosol | 21.01 | 25.43 |
| AT4G17210.1 | Thale cress | cytosol, plastid | 20.85 | 25.05 |
| CDY35594 | Canola | nucleus | 20.38 | 24.67 |
| CDY15972 | Canola | cytosol | 28.44 | 20.07 |
| CDY26542 | Canola | cytosol | 28.91 | 18.14 |
| Bra026987.1-P | Field mustard | cytosol | 28.91 | 18.14 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 19.91 | 15.37 |
| GSMUA_Achr10P... | Banana | cytosol | 19.59 | 15.21 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 14.69 | 14.81 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 19.12 | 14.72 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 19.75 | 14.25 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP15310_001 | EnsemblPlants:GSMUA_AchrUn_randomT15310_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG15310_001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF3 | PFAM:PF05701 | SEG:seg | UniParc:UPI000294EA2D | UniProt:M0U9E0 | MapMan:35.1 |
Description
prefoldin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15310_001]
Coordinates
chrchrUn_random:-:72170102..72172895
Molecular Weight (calculated)
69866.6 Da
IEP (calculated)
5.835
GRAVY (calculated)
-0.678
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: METKAGQNGT DLPKAEIDTR APFKSVKAAV SLFGEVAFTS DRSTVRKPKP PPPESGLPKE TQLHLAKKEL NKYREQLDNA AKTRTHALVE LERVRRTFEE
101: LTNKLNAVNE SKELALKATD VVKAQTKNLE DVSSVENNGH DGGWEQEFNN AKEQYAIVVV ELNAAKQELR RIRKDFEASA EAKLTAIYQE GKAKQLLDAC
201: NENVAQLSME IRTSQESLAD VKLVTEQAQQ EESKIRSEKD SSKQACKQAL EETERKMASL KKESDPQVLK NLEAKLAETA SEIGTVKKEM EVARVSDLEL
301: FTAMGAELDG AKGMLQKLAE EESWFRSLVD SLKLELGAVK NERAELKEKD AETGFVVSNL NLKIQKCKAE LEAAMAADSK ATSASDDLVS APQQLSSAEK
401: KKSGEELRDE AEKKLQGAPT DADVAVASEA NVTISKEEYE SLTCKVEESE RLMERKVAAA MAQVEVVRAS ENEVSKKLEA AQKEMEEIEA ATKVALKRAE
501: MAEAAKNAVE GELRRWRDKA QQRAGETHQS AGALPPRPTV HNVKPGEKSE EHRKVLKAMA SRKTFLSNLS GILHRKKSSV DGGGSPSHPP GEKPLCSSVG
601: YESLTRSCPN LCCCKQCHFI SWELHFDYDC LVI
101: LTNKLNAVNE SKELALKATD VVKAQTKNLE DVSSVENNGH DGGWEQEFNN AKEQYAIVVV ELNAAKQELR RIRKDFEASA EAKLTAIYQE GKAKQLLDAC
201: NENVAQLSME IRTSQESLAD VKLVTEQAQQ EESKIRSEKD SSKQACKQAL EETERKMASL KKESDPQVLK NLEAKLAETA SEIGTVKKEM EVARVSDLEL
301: FTAMGAELDG AKGMLQKLAE EESWFRSLVD SLKLELGAVK NERAELKEKD AETGFVVSNL NLKIQKCKAE LEAAMAADSK ATSASDDLVS APQQLSSAEK
401: KKSGEELRDE AEKKLQGAPT DADVAVASEA NVTISKEEYE SLTCKVEESE RLMERKVAAA MAQVEVVRAS ENEVSKKLEA AQKEMEEIEA ATKVALKRAE
501: MAEAAKNAVE GELRRWRDKA QQRAGETHQS AGALPPRPTV HNVKPGEKSE EHRKVLKAMA SRKTFLSNLS GILHRKKSSV DGGGSPSHPP GEKPLCSSVG
601: YESLTRSCPN LCCCKQCHFI SWELHFDYDC LVI
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.