Factsheet for GSMUA_Achr10P19350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr5P17590_001
GSMUA_Achr5P24580_001
GSMUA_Achr6P10120_001
GSMUA_Achr9P27100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26570.1	GSMUA_Achr10P...	AT2G26570.1	20974974
AT2G26570.1	GSMUA_Achr5P17590_001	AT2G26570.1	20974974
AT2G26570.1	GSMUA_Achr5P24580_001	AT2G26570.1	20974974
AT2G26570.1	GSMUA_Achr6P10120_001	AT2G26570.1	20974974
AT2G26570.1	GSMUA_Achr9P27100_001	AT2G26570.1	20974974

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g042150.1.1	Tomato	cytosol	13.13	55.73
Solyc07g026880.1.1	Tomato	cytosol	9.94	52.6
GSMUA_Achr6P10120_001	Banana	nucleus	53.74	49.94
Bra034308.1-P	Field mustard	nucleus	38.77	48.84
GSMUA_Achr5P17590_001	Banana	nucleus	44.54	44.27
Solyc04g078950.1.1	Tomato	nucleus	16.56	44.26
CDX77048	Canola	nucleus	40.86	43.99
CDY48180	Canola	nucleus	38.65	42.68
AT2G26570.1	Thale cress	nucleus	41.84	42.26
Bra041137.1-P	Field mustard	nucleus	28.59	41.53
TraesCS1D01G248300.1	Wheat	nucleus, plastid	36.32	41.28
VIT_18s0001g10560.t01	Wine grape	nucleus	42.45	41.0
Os03t0395300-01	Rice	plasma membrane	39.02	40.98
AT4G33390.1	Thale cress	nucleus	39.02	40.82
Solyc07g022910.2.1	Tomato	plastid	41.72	40.14
TraesCS1A01G248800.1	Wheat	nucleus	38.4	40.13
TraesCS1B01G259500.1	Wheat	nucleus	37.55	40.05
KRH07566	Soybean	nucleus	29.94	39.67
TraesCS2A01G166400.1	Wheat	cytosol	38.28	39.34
CDY46119	Canola	nucleus	32.64	39.18
HORVU2Hr1G030630.1	Barley	nucleus	37.79	38.84
CDX72400	Canola	nucleus	32.27	38.68
EER92167	Sorghum	nucleus	37.18	38.65
GSMUA_Achr9P27100_001	Banana	nucleus	38.9	38.56
CDX68971	Canola	mitochondrion, nucleus, plastid	38.04	38.46
PGSC0003DMT400011385	Potato	nucleus	42.58	38.43
Zm00001d047240_P002	Maize	nucleus	36.81	38.22
TraesCS2B01G192300.1	Wheat	nucleus	39.39	38.17
Zm00001d029420_P002	Maize	nucleus	36.56	38.01
PGSC0003DMT400039921	Potato	nucleus	39.75	37.85
Solyc08g015840.1.1	Tomato	cytosol	9.08	37.76
Bra033647.1-P	Field mustard	nucleus	33.37	37.73
CDY22380	Canola	nucleus	33.25	37.69
Zm00001d022161_P001	Maize	nucleus	36.93	37.62
CDX71526	Canola	nucleus	33.25	37.43
KRH45361	Soybean	nucleus	26.87	37.37
TraesCS2D01G173700.1	Wheat	nucleus	38.53	37.34
Solyc12g088830.1.1	Tomato	nucleus	38.16	36.89
KXG36701	Sorghum	nucleus	37.18	36.73
Os07t0619100-01	Rice	plasma membrane	36.69	36.6
CDY43212	Canola	nucleus	31.66	36.13
AT5G42880.1	Thale cress	nucleus	33.25	36.09
AT1G45545.2	Thale cress	nucleus	32.88	35.59
KRH51982	Soybean	nucleus	41.35	35.36
CDY17108	Canola	nucleus	31.29	34.88
Bra014049.1-P	Field mustard	nucleus	32.15	34.75
CDY17054	Canola	nucleus	30.18	34.65
HORVU1Hr1G062330.8	Barley	nucleus	38.4	34.62
Bra040259.1-P	Field mustard	nucleus	31.04	34.56
PGSC0003DMT400020677	Potato	nucleus	40.98	34.43
KRH61284	Soybean	nucleus	40.61	34.02
CDY62582	Canola	nucleus	30.55	34.02
GSMUA_Achr5P24580_001	Banana	cytosol	25.89	33.6
Os06t0314000-01	Rice	cytosol, nucleus	20.12	32.41
KRH15355	Soybean	nucleus	39.75	32.08
TraesCS4B01G300400.1	Wheat	nucleus	30.18	28.44
GSMUA_Achr7P16580_001	Banana	cytosol	16.07	21.27
GSMUA_Achr4P18510_001	Banana	nucleus	15.09	20.07
GSMUA_AchrUn_...	Banana	nucleus	15.21	19.59

Protein Annotations

EnsemblPlants:GSMUA_Achr10P19350_001	EnsemblPlants:GSMUA_Achr10T19350_001	EnsemblPlantsGene:GSMUA_Achr10G19350_001	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054
PANTHER:PTHR32054:SF2	PFAM:PF05701	SEG:seg	UniParc:UPI0002954DD8	UniProt:M0RJL0	MapMan:35.1

Description

paramyosin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G19350_001]

Coordinates

chr10:-:25775084..25778375

Molecular Weight (calculated)

90803.3 Da

IEP (calculated)

5.045

GRAVY (calculated)

-0.631

Length

815 amino acids

Sequence
(BLAST)

001: MEETKVIEDQ FSGEHLLTIS CSAESLPTIG PPKFSCHDEN IDTIHHQEGA TKNAKKKVEQ YIADNAEYVD RPDTKDQKEA VIKEPELSLK HIVYDVPSLG
101: QNTLDHIVVT NHQQGMILED SVCPVQQGLS AISSQDHNIP DPQISNVLGD SISGVSVLSY GDITYPISHS FELQKMELES TPSQLQNGTS INLVETPRVT
201: DSTTSCENRK IMESTPSLPE LATTAEPIKT VYINRGIVDT SAPFESVKEA VTKFGGIVDW KAHRQNSLEK RKLLQLELER VQADIPECKK QSEAAEEIKA
301: QVLKELDRTN VIIEELKLNL EKVQTEEAQA KQDSELAQMR VKEMEQGIST ESSVAAKTRV ELAKARHEAA VAELKKVKSE LKTLQGEYMS LVSERDFATR
401: QAEDAISALK EIEMTAEELT LELITRKESL ESAHAAHLEA EEHRIGAALA REQDCLAWEK ELKHAEEELE QLNQQLLLTK DLKSKLETAS ALLLKLKAEL
501: TAYMESKLNQ ESESIENKLS DDVEETEKTQ SITHALALTR KELEEVKASI EKAQDEVGMA SIAEKTAREK MAELPKLLQH AAQEADQSKS VAQIAREELR
601: KSKEEADEAK ASASTIEIRL HAALKEIEAA RSSERMALVA IKALQESEQA ASIYGTDSPH SVTLPLDEYH NLSKRAHEAE ELAHERIAAA IAQIDVAKQS
701: EVKSLERLDD AYGEMRARKE ALKVATEKAE KAMEGKLGAE QGLRKWRAEH EQRRRAGSYT KEKSDAVHSM TNPKSYVPED NSENDVPKVK TMKKKTSLVP
801: KIVLSLARKK SQPVK

Best Arabidopsis Sequence Match ( AT2G26570.1 )
(BLAST)

001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN

Arabidopsis Description

WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.