Factsheet for Os07t0619100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
PTS1:	peroxisome
WoLF PSORT:	nucleus
YLoc:	nucleus

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0395300-01
Os06t0314000-01
Os07t0619100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26570.1	Os03t0395300-01	AT2G26570.1	20974974
AT2G26570.1	Os06t0314000-01	AT2G26570.1	20974974
AT2G26570.1	Os07t0619100-01	AT2G26570.1	20974974

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022161_P001	Maize	nucleus	59.0	60.25
KXG36701	Sorghum	nucleus	58.26	57.7
TraesCS2A01G166400.1	Wheat	cytosol	55.57	57.25
HORVU2Hr1G030630.1	Barley	nucleus	55.2	56.87
TraesCS2B01G192300.1	Wheat	nucleus	56.55	54.93
TraesCS2D01G173700.1	Wheat	nucleus	56.18	54.58
Os03t0395300-01	Rice	plasma membrane	49.57	52.19
Solyc05g042150.1.1	Tomato	cytosol	11.75	50.0
Solyc07g026880.1.1	Tomato	cytosol	8.94	47.4
Bra034308.1-P	Field mustard	nucleus	36.6	46.21
Solyc04g078950.1.1	Tomato	nucleus	16.16	43.28
CDY48180	Canola	nucleus	38.07	42.14
AT4G33390.1	Thale cress	nucleus	39.05	40.95
GSMUA_Achr6P10120_001	Banana	nucleus	43.7	40.71
CDX77048	Canola	nucleus	37.58	40.55
Bra041137.1-P	Field mustard	nucleus	27.66	40.29
CDX72400	Canola	nucleus	33.41	40.15
CDY46119	Canola	nucleus	33.29	40.06
AT2G26570.1	Thale cress	nucleus	39.53	40.02
VIT_18s0001g10560.t01	Wine grape	nucleus	41.25	39.93
PGSC0003DMT400039921	Potato	nucleus	41.49	39.6
CDX68971	Canola	mitochondrion, nucleus, plastid	38.31	38.83
Solyc12g088830.1.1	Tomato	nucleus	39.9	38.67
Solyc07g022910.2.1	Tomato	plastid	40.02	38.61
GSMUA_Achr5P17590_001	Banana	nucleus	38.43	38.29
Solyc08g015840.1.1	Tomato	cytosol	9.06	37.76
PGSC0003DMT400011385	Potato	nucleus	40.88	36.99
GSMUA_Achr10P...	Banana	cytosol	36.6	36.69
CDY22380	Canola	nucleus	32.07	36.44
Bra033647.1-P	Field mustard	nucleus	32.07	36.34
CDX71526	Canola	nucleus	31.58	35.64
KRH07566	Soybean	nucleus	26.81	35.61
Os06t0314000-01	Rice	cytosol, nucleus	21.79	35.18
CDY43212	Canola	nucleus	30.48	34.87
AT1G45545.2	Thale cress	nucleus	31.95	34.66
CDY17054	Canola	nucleus	30.11	34.65
KRH45361	Soybean	nucleus	24.72	34.47
AT5G42880.1	Thale cress	nucleus	31.58	34.35
Bra014049.1-P	Field mustard	nucleus	30.97	33.55
KRH51982	Soybean	nucleus	39.05	33.47
PGSC0003DMT400020677	Potato	nucleus	39.66	33.4
KRH61284	Soybean	nucleus	38.31	32.17
CDY17108	Canola	nucleus	28.76	32.15
Bra040259.1-P	Field mustard	nucleus	28.76	32.1
CDY62582	Canola	nucleus	28.4	31.69
KRH15355	Soybean	nucleus	37.7	30.5
Os09t0458000-00	Rice	plasma membrane	29.25	28.62
Os12t0271600-01	Rice	plasma membrane	19.46	24.57

Protein Annotations

MapMan:20.5.8.1	EntrezGene:4343923	ProteinID:BAC10118.1	ProteinID:BAF22205.1	ProteinID:BAT02675.1	ncoils:Coil
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150
GO:GO:0009903	GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:Os07g0619100	EnsemblPlants:Os07t0619100-01
PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF16	UniProt:Q8LHQ6	UniParc:UPI00000A4A85	InterPro:Web
RefSeq:XP_015647912.1	SEG:seg	:	:	:	:

Description

Protein of unknown function DUF827, plant family protein. (Os07t0619100-01)

Coordinates

chr7:+:25563426..25567841

Molecular Weight (calculated)

91266.8 Da

IEP (calculated)

4.819

GRAVY (calculated)

-0.766

Length

817 amino acids

Sequence
(BLAST)

001: MELTCSSEES NSKENSVNSS SSPIESSGPF VYYPTPPATK DDAGNSSDHE KPNAHSEKSS QPVILKYSNG LTDHVGCMDS PSSIVERSLL DSTKPHMESN
101: SATDAIPEIL SNSGLSEAFN HSVKDEADGS SEDALEVNHL SDNVSAGAET MLTDEMNSKE DRIDQKNVAV KPKMVEEQGA APESPYKGLI DTAAPFESVR
201: EAVTKFGGIV DWKAHKAQMM ERRKFIQLEL EKVQKEIPLY KEELEAAEMV KSQVVNELED TRRIIEELKH NLEKAQVEEV QAKQDSELAL LRAQEIEQGV
301: ADEASVIAKT QIEVAKERHE KAIAELNSVK EELKTVHEQY VTLINERDTA IKRSEEVISV GKDIEKRVEE LTLELIASKG SLELAHAAHH EAEERRIGAA
401: LEKEEDCVAW DRELQQAQEE LQQLNNKLLS KSDVKQNLDT NLRRLRSLKS ELATYVQNVI SEEAEGLVKE HGPDDAQQIS GPVKEALASA QKELEEVRAN
501: IEKAKNEAKL FKLAATTLRS EMDNEKSSLV ELQQREGMAS IAICALEAEL NRTKQEIEYV KSKEEDAQER MVELPRILQE AAQEAEDAKM VAFSVQEQVR
601: KAREETEKTK TAAATVNTRL SAVLKEIDAS KASKKLAFAA VQALQESEEA GDDENSPRGV TLPLSEYYTL SKKVHEAEQL AHESVTEALA QVESAKASES
701: NSLERLCEAS KRMNEKKEAL ERALERAERA NQGKLTAEQE LRKWRADHEQ RRKAQEAAKR AVNPLSSSPK RIVEQKDSFY KEFSGNSYED LVPNRKLRRK
801: KSFFPLMGSL LSRKTRA

Best Arabidopsis Sequence Match ( AT2G26570.1 )
(BLAST)

001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN

Arabidopsis Description

WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.