Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17054 | Canola | nucleus | 88.1 | 88.59 |
| CDY17108 | Canola | nucleus | 71.57 | 69.9 |
| AT1G45545.2 | Thale cress | nucleus | 68.49 | 64.94 |
| CDY62582 | Canola | nucleus | 66.39 | 64.75 |
| CDX71526 | Canola | nucleus | 51.4 | 50.69 |
| CDY22380 | Canola | nucleus | 50.98 | 50.63 |
| Solyc05g042150.1.1 | Tomato | cytosol | 12.89 | 47.92 |
| Solyc07g026880.1.1 | Tomato | cytosol | 8.82 | 40.91 |
| CDX77048 | Canola | nucleus | 42.44 | 40.03 |
| CDY48180 | Canola | nucleus | 41.18 | 39.84 |
| CDY46119 | Canola | nucleus | 37.53 | 39.47 |
| CDX72400 | Canola | nucleus | 37.11 | 38.97 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 43.14 | 38.21 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 42.44 | 35.9 |
| KRH07566 | Soybean | nucleus | 30.39 | 35.28 |
| Solyc07g022910.2.1 | Tomato | plastid | 41.6 | 35.06 |
| Solyc04g078950.1.1 | Tomato | nucleus | 14.85 | 34.75 |
| PGSC0003DMT400039921 | Potato | nucleus | 41.46 | 34.58 |
| Solyc12g088830.1.1 | Tomato | nucleus | 39.92 | 33.81 |
| PGSC0003DMT400011385 | Potato | nucleus | 42.3 | 33.44 |
| KRH45361 | Soybean | nucleus | 27.31 | 33.28 |
| Solyc08g015840.1.1 | Tomato | cytosol | 8.96 | 32.65 |
| Os03t0395300-01 | Rice | plasma membrane | 35.43 | 32.6 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 39.92 | 32.5 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 32.21 | 32.08 |
| GSMUA_Achr10P... | Banana | cytosol | 36.13 | 31.66 |
| Zm00001d047240_P002 | Maize | nucleus | 33.89 | 30.83 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 35.43 | 30.78 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 34.03 | 30.64 |
| KRH51982 | Soybean | nucleus | 40.9 | 30.64 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 32.77 | 30.63 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 33.89 | 30.52 |
| PGSC0003DMT400020677 | Potato | nucleus | 41.46 | 30.52 |
| Zm00001d029420_P002 | Maize | nucleus | 33.47 | 30.48 |
| Os07t0619100-01 | Rice | plasma membrane | 34.87 | 30.48 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 32.91 | 30.13 |
| EER92167 | Sorghum | nucleus | 32.91 | 29.97 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 34.17 | 29.76 |
| KRH61284 | Soybean | nucleus | 40.2 | 29.5 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 34.73 | 29.49 |
| KXG36701 | Sorghum | nucleus | 34.03 | 29.45 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 34.45 | 29.25 |
| Zm00001d022161_P001 | Maize | nucleus | 32.77 | 29.25 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 24.79 | 28.18 |
| KRH15355 | Soybean | nucleus | 39.78 | 28.12 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 33.47 | 26.44 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 28.99 | 23.93 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 16.53 | 23.32 |
| CDY42964 | Canola | cytosol | 15.27 | 20.96 |
| CDY35594 | Canola | nucleus | 14.99 | 20.46 |
| CDY58167 | Canola | cytosol | 14.85 | 20.38 |
| CDY31245 | Canola | cytosol | 15.55 | 20.26 |
| CDY50127 | Canola | cytosol | 14.71 | 20.08 |
| CDX90485 | Canola | cytosol | 14.71 | 19.81 |
| CDY28631 | Canola | nucleus | 17.93 | 19.63 |
| CDY21038 | Canola | cytosol | 14.99 | 19.56 |
| CDY17364 | Canola | nucleus | 17.79 | 19.45 |
| CDY09639 | Canola | cytosol | 14.43 | 19.4 |
| CDY36768 | Canola | nucleus | 17.37 | 19.22 |
| CDY11973 | Canola | nucleus | 16.95 | 18.82 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 6.86 | 16.9 |
| CDY15972 | Canola | cytosol | 17.51 | 13.94 |
| CDY26542 | Canola | cytosol | 16.67 | 11.79 |
| CDY35593 | Canola | cytosol | 5.04 | 10.68 |
Protein Annotations
| EnsemblPlants:CDY43212 | EnsemblPlantsGene:GSBRNA2T00076225001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | ProteinID:CDY43212 | ProteinID:CDY43212.1 | SEG:seg | UniParc:UPI0004EDC2E9 | UniProt:A0A078HZ98 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g04850DBnaC08g04850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ98]
Coordinates
chrLK032549:+:23818..26159
Molecular Weight (calculated)
80008.0 Da
IEP (calculated)
4.888
GRAVY (calculated)
-0.788
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDDDKVSND FSLLPGLNDD SSTPFNNSLE FDSSILDLLT MEDGRETPNL LPDHNPFLES QHAPPQEDQH IFAEAVSPKV YIAPRVMTNH EDSFSLDSRI
101: DSIEDARIIS LPDSPRGSQD VGLSRLRVPG SPRAFVHPRT SGSPRFGSPT SPVLIDTTAP FESVKDAVSK FGGITDWKAH KIQTIERRKT VDQDLEKIQE
201: DMPEYKKQAV VAEEAKEQVV MELERTRSIV EKLKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGESS VAAKAQIQVA KERHSSAVSE LRNLREEIET
301: DSVLEAKDVE KQMTDLTIEV IATKQLLESA QAAHLEAEEK KFDAAMARDQ DLYNREKELK MVEEEIERLR QEIHAADDVK IKLETASVLQ QDLRAEIPAY
401: KDSNDKRNSS DIQAAVDSAR KELEEVKSNI EKANSEVKTL KIIVGSLQSE LERENKDLSE TKYREEISVQ RNSEEAREEG CKEIAKKLQE AKKEAEEAKS
501: LALAAREALR KAKEEEMEAA KASEKLALAA IKALQETECG KKIEDVSSSP RSIIVSVVEY YELSKKAHEV EEAANRKLSE IVAQIEVAKE EESRVLENLE
601: EVNKETALQK EKLKEAMGKV EKARDGKVGM DHELRKWSSE KSPKTSPEGG VKENHDLGKS KSALHSAASF AFGEQGSNNV GDSNNVTPET KKKKKKFSLL
701: PKVFLFLSRK KSNK
101: DSIEDARIIS LPDSPRGSQD VGLSRLRVPG SPRAFVHPRT SGSPRFGSPT SPVLIDTTAP FESVKDAVSK FGGITDWKAH KIQTIERRKT VDQDLEKIQE
201: DMPEYKKQAV VAEEAKEQVV MELERTRSIV EKLKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGESS VAAKAQIQVA KERHSSAVSE LRNLREEIET
301: DSVLEAKDVE KQMTDLTIEV IATKQLLESA QAAHLEAEEK KFDAAMARDQ DLYNREKELK MVEEEIERLR QEIHAADDVK IKLETASVLQ QDLRAEIPAY
401: KDSNDKRNSS DIQAAVDSAR KELEEVKSNI EKANSEVKTL KIIVGSLQSE LERENKDLSE TKYREEISVQ RNSEEAREEG CKEIAKKLQE AKKEAEEAKS
501: LALAAREALR KAKEEEMEAA KASEKLALAA IKALQETECG KKIEDVSSSP RSIIVSVVEY YELSKKAHEV EEAANRKLSE IVAQIEVAKE EESRVLENLE
601: EVNKETALQK EKLKEAMGKV EKARDGKVGM DHELRKWSSE KSPKTSPEGG VKENHDLGKS KSALHSAASF AFGEQGSNNV GDSNNVTPET KKKKKKFSLL
701: PKVFLFLSRK KSNK
001: MMDDDHKVSN DISLLPDLNF DSSSPFTSIE FDSSICDLLN LETGGDTPNL IPDHNPFFDS FDGLQEEEED SHFVVEPESP KVYIAPRVMI NHQDSFSLDS
101: RNDEYIEDVK ILPGSPGGIQ DLGLSRLKVP GSPRAFVHPR SSGSPRFVSP TSPVLIDTAA PFESVKEAVS KFGGITDWKA HKIQTIERRK TVDQELEKIQ
201: EDMPDYKKQA VVAEEAKHQV VMELERTRNV VEELKLELEK AEKEEQQAKQ DSDLAKLRVE EMEQGIAGEV SVAAKSQLEV AKARHLSAVS ELGTIREEIE
301: MVSNEYESLL TEKDLAAKKA EDSVLKAKDV EKQMEGLTME VIATKQLLEL AHATHLEAQE KKLDAAMARD QDVYNQEKEL KMVEDEIKRF RQDIDAADDV
401: KTKLKTASAL QQDLRAEIAA YKDSNMGKRN NSDIQAAVDS ARKELEEVIS NIEKANSEVK TLKIIVGSLQ SELAREKHDL SETRQRNRED TREEKCTEIA
501: KKLQEASREA EEAKSLAIAA REELRKAKEE SDEAKTGLSA VERQLMESKK EMEASRASEK LALAAIKALQ ETEYANKIED ISSSPKSIII SVEEYYELSK
601: QAHEVEEAAN RKLAEIVSKI EVAKEEESRI LENLEEVSRE TAIRKVELKE AMTKVEKARD GKVGMDHELR KWRSDNGNRS PEGGNKENLS KSKSALHQPT
701: TFTFGEQASS SNVTPQASSS NVTPETETKK KKKRFSLLPK VFMFLSRKKS SNK
101: RNDEYIEDVK ILPGSPGGIQ DLGLSRLKVP GSPRAFVHPR SSGSPRFVSP TSPVLIDTAA PFESVKEAVS KFGGITDWKA HKIQTIERRK TVDQELEKIQ
201: EDMPDYKKQA VVAEEAKHQV VMELERTRNV VEELKLELEK AEKEEQQAKQ DSDLAKLRVE EMEQGIAGEV SVAAKSQLEV AKARHLSAVS ELGTIREEIE
301: MVSNEYESLL TEKDLAAKKA EDSVLKAKDV EKQMEGLTME VIATKQLLEL AHATHLEAQE KKLDAAMARD QDVYNQEKEL KMVEDEIKRF RQDIDAADDV
401: KTKLKTASAL QQDLRAEIAA YKDSNMGKRN NSDIQAAVDS ARKELEEVIS NIEKANSEVK TLKIIVGSLQ SELAREKHDL SETRQRNRED TREEKCTEIA
501: KKLQEASREA EEAKSLAIAA REELRKAKEE SDEAKTGLSA VERQLMESKK EMEASRASEK LALAAIKALQ ETEYANKIED ISSSPKSIII SVEEYYELSK
601: QAHEVEEAAN RKLAEIVSKI EVAKEEESRI LENLEEVSRE TAIRKVELKE AMTKVEKARD GKVGMDHELR KWRSDNGNRS PEGGNKENLS KSKSALHQPT
701: TFTFGEQASS SNVTPQASSS NVTPETETKK KKKRFSLLPK VFMFLSRKKS SNK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.