Factsheet for Os06t0314000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0395300-01
Os06t0314000-01
Os07t0619100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26570.1	Os03t0395300-01	AT2G26570.1	20974974
AT2G26570.1	Os06t0314000-01	AT2G26570.1	20974974
AT2G26570.1	Os07t0619100-01	AT2G26570.1	20974974

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g078950.1.1	Tomato	nucleus	22.33	37.05
TraesCS4B01G300400.1	Wheat	nucleus	55.53	32.49
Bra034308.1-P	Field mustard	nucleus	36.76	28.75
KRH45361	Soybean	nucleus	32.21	27.82
KRH07566	Soybean	nucleus	32.21	26.5
CDX77048	Canola	nucleus	38.34	25.63
CDY48180	Canola	nucleus	37.35	25.61
Bra041137.1-P	Field mustard	nucleus	27.47	24.78
AT2G26570.1	Thale cress	nucleus	38.54	24.16
VIT_18s0001g10560.t01	Wine grape	nucleus	40.12	24.05
Os03t0395300-01	Rice	plasma membrane	36.76	23.97
Solyc07g022910.2.1	Tomato	plastid	39.13	23.38
AT4G33390.1	Thale cress	nucleus	35.97	23.36
CDX72400	Canola	nucleus	30.43	22.65
CDY46119	Canola	nucleus	30.24	22.53
GSMUA_Achr6P10120_001	Banana	nucleus	38.54	22.23
CDX68971	Canola	mitochondrion, nucleus, plastid	34.98	21.96
GSMUA_Achr5P17590_001	Banana	nucleus	35.57	21.95
PGSC0003DMT400011385	Potato	nucleus	39.13	21.93
Os07t0619100-01	Rice	plasma membrane	35.18	21.79
Solyc12g088830.1.1	Tomato	nucleus	35.77	21.47
PGSC0003DMT400039921	Potato	nucleus	36.17	21.38
CDX71526	Canola	nucleus	28.85	20.17
GSMUA_Achr10P...	Banana	cytosol	32.41	20.12
CDY22380	Canola	nucleus	28.46	20.03
Bra033647.1-P	Field mustard	nucleus	28.06	19.69
PGSC0003DMT400020677	Potato	nucleus	37.75	19.69
KRH51982	Soybean	nucleus	36.96	19.62
KRH61284	Soybean	nucleus	36.96	19.22
AT5G42880.1	Thale cress	nucleus	27.87	18.77
KRH15355	Soybean	nucleus	36.56	18.32
AT1G45545.2	Thale cress	nucleus	25.89	17.4
Bra014049.1-P	Field mustard	nucleus	25.89	17.37
CDY17054	Canola	nucleus	23.32	16.62
CDY43212	Canola	nucleus	23.32	16.53
CDY62582	Canola	nucleus	23.32	16.12
Bra040259.1-P	Field mustard	nucleus	22.92	15.85
Os09t0458000-00	Rice	plasma membrane	26.09	15.81
Os12t0271600-01	Rice	plasma membrane	20.16	15.77
CDY17108	Canola	nucleus	22.33	15.46
Solyc05g042150.1.1	Tomato	cytosol	5.34	14.06
Solyc07g026880.1.1	Tomato	cytosol	4.15	13.64
Solyc08g015840.1.1	Tomato	cytosol	4.55	11.73

Protein Annotations

EnsemblPlants:Os06t0314000-01	EnsemblPlantsGene:Os06g0314000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0009903	GO:GO:0009904	GO:GO:0009987	GO:GO:0016043
InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF19	PFAM:PF05701	ProteinID:BAS97454.1
SEG:seg	UniParc:UPI000393BECD	UniProt:A0A0P0WVS6	MapMan:35.1	:	:

Description

Protein of unknown function DUF827, plant domain containing protein. (Os06t0314000-01)

Coordinates

chr6:-:12050705..12052390

Molecular Weight (calculated)

56586.6 Da

IEP (calculated)

5.680

GRAVY (calculated)

-0.557

Length

506 amino acids

Sequence
(BLAST)

001: VLANLMLVKD ESGKVQENYE TLLIERDISI GKAQLAVSMS EGAVRKVEEL TVELNRLKVE LELAHSTCHD AEKHSKDTSL ACDEDSLKWK SDLRQAEEEL
101: NQLAKKISSI EELKSTLDTS TGLLLKLKNE LAGYVEAKPI DKEAQGNITQ RSLHNEVILS TRELEECLMS VDKVRDEVCA LNVAAASLKT ELIKEKTALA
201: TMKQMEATSS IAAASLRVEI QLALRELEAV QAKEKESRNG MLGLQKIMED TAKEADESKS IAREAQEKLR KAKEDMDHAK SCLDTMEFRI QAVLKEMEAT
301: KESMRLAIDA LRPFDSELPV DIEEQGSQIV TVDLDEYQSL IAKSSKAEEL VHERTASAIA QAKIAKESES RTLSTLSETH KVLEQRKQAL VAATERADRA
401: TEGKLAMEQE LRKWREENEQ RRKAGEALKS QLNPSSTPVI IVERSSDTKS TSKDDSYASV HPLLDMSARS TPNDSALLSN KKKRKKLSFF PRITMFFTRK
501: KSRAAI

Best Arabidopsis Sequence Match ( AT2G26570.1 )
(BLAST)

001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN

Arabidopsis Description

WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.