Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62582 | Canola | nucleus | 82.51 | 82.51 |
| Bra014049.1-P | Field mustard | nucleus | 71.31 | 69.23 |
| AT1G45545.2 | Thale cress | nucleus | 69.13 | 67.2 |
| Bra041137.1-P | Field mustard | nucleus | 43.44 | 56.68 |
| Bra033647.1-P | Field mustard | nucleus | 49.32 | 50.07 |
| Bra034308.1-P | Field mustard | nucleus | 39.62 | 44.82 |
| Solyc05g042150.1.1 | Tomato | cytosol | 11.75 | 44.79 |
| Solyc04g078950.1.1 | Tomato | nucleus | 17.35 | 41.64 |
| Solyc07g026880.1.1 | Tomato | cytosol | 8.74 | 41.56 |
| KRH07566 | Soybean | nucleus | 31.01 | 36.91 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 42.21 | 36.61 |
| Solyc07g022910.2.1 | Tomato | plastid | 41.94 | 36.25 |
| KRH45361 | Soybean | nucleus | 28.14 | 35.15 |
| PGSC0003DMT400039921 | Potato | nucleus | 40.98 | 35.05 |
| Solyc12g088830.1.1 | Tomato | nucleus | 40.3 | 34.99 |
| PGSC0003DMT400011385 | Potato | nucleus | 42.35 | 34.33 |
| KRH51982 | Soybean | nucleus | 41.94 | 32.21 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 31.42 | 32.08 |
| Os03t0395300-01 | Rice | plasma membrane | 33.74 | 31.83 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 38.11 | 31.81 |
| PGSC0003DMT400020677 | Potato | nucleus | 42.08 | 31.75 |
| GSMUA_Achr10P... | Banana | cytosol | 34.56 | 31.04 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 34.43 | 30.66 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 32.65 | 30.64 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 31.97 | 30.63 |
| KRH61284 | Soybean | nucleus | 40.16 | 30.22 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 32.65 | 30.14 |
| Zm00001d022161_P001 | Maize | nucleus | 32.92 | 30.12 |
| Zm00001d029420_P002 | Maize | nucleus | 32.24 | 30.1 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 33.47 | 29.88 |
| EER92167 | Sorghum | nucleus | 31.97 | 29.85 |
| Zm00001d047240_P002 | Maize | nucleus | 31.83 | 29.68 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 32.1 | 29.63 |
| Solyc08g015840.1.1 | Tomato | cytosol | 7.92 | 29.59 |
| KXG36701 | Sorghum | nucleus | 33.2 | 29.45 |
| KRH15355 | Soybean | nucleus | 40.57 | 29.41 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 24.73 | 28.82 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 33.06 | 28.78 |
| Os07t0619100-01 | Rice | plasma membrane | 32.1 | 28.76 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 32.92 | 28.66 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 32.65 | 26.44 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 29.1 | 24.62 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 15.85 | 22.92 |
| Bra016786.1-P | Field mustard | cytosol | 15.71 | 21.02 |
| Bra021064.1-P | Field mustard | cytosol | 14.62 | 20.54 |
| Bra002870.1-P | Field mustard | nucleus | 17.62 | 19.75 |
| Bra026233.1-P | Field mustard | cytosol | 13.93 | 19.58 |
| Bra028956.1-P | Field mustard | nucleus | 17.21 | 19.57 |
| Bra026987.1-P | Field mustard | cytosol | 18.17 | 13.18 |
Protein Annotations
Description
AT1G45545 (E=1e-139) | unknown protein
Coordinates
chrScaffold000193:+:46845..49195
Molecular Weight (calculated)
82353.6 Da
IEP (calculated)
4.835
GRAVY (calculated)
-0.761
Length
732 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDDDKASND FSLLPDLNDD FSTPFTSIEF DSSILDLINL EDGGETPNLL PEHNPFLESV NTFQEDEDLH FSVEAESPKV YIAPRAIINH HDSFSLDPRI
101: DTIEDARISF PDSPRGSHDL SLSRLKVPGS PRALALPRAS GSPRFGSPTS PAALIDTAAP FESVKDAVSK FGGITDWKAH KIQTIEKRKT VDQELEKIQE
201: DMPEYKKQAF VAEEAKQQVV MELERTKSVV EELKMELEKA EKEEQQAKQD SDLAKLRVEE MEHGIADASS IAVKTQLEVA KVRHVSAVSE QRVDSVLAAK
301: EVEKQMTGLT IEVIATKELL ESARAAHLEA EENKLEAAMA RDQDVYNREK ELKMVEEEIE RFRQEMHASD DVRIKIETAS VLQQDLRAEI TSYKDDNMMI
401: EKRNNSDIQA AVDSTRKELE EVKSNIGKAI SEVKTLKIIV GSLQSELERE KKDLSETKQR EALSVHRNSK EAREERCSEI AKKLQEANKE AEEATSLASA
501: AQEELRKAKE ESEEARTGVS AIESQLVEAK REMEAAKASE KLALAAIKAL QETEYSTKIE DISTPRSIII SVEEYYELSK QAHEVEEAAN KKLAEIVSQI
601: EVAKEEESRV LEKIEEVNRE TAFQREKLKE AMDKVEKARD KKVSMDHELR KWSSENGKRS PMSSPEGGEK ESHDLGKSKS ALHSARSFAF GEEGSNNVGD
701: SSNVTHETKK KKKRFSLLPK VFMFLSRKKS NK
101: DTIEDARISF PDSPRGSHDL SLSRLKVPGS PRALALPRAS GSPRFGSPTS PAALIDTAAP FESVKDAVSK FGGITDWKAH KIQTIEKRKT VDQELEKIQE
201: DMPEYKKQAF VAEEAKQQVV MELERTKSVV EELKMELEKA EKEEQQAKQD SDLAKLRVEE MEHGIADASS IAVKTQLEVA KVRHVSAVSE QRVDSVLAAK
301: EVEKQMTGLT IEVIATKELL ESARAAHLEA EENKLEAAMA RDQDVYNREK ELKMVEEEIE RFRQEMHASD DVRIKIETAS VLQQDLRAEI TSYKDDNMMI
401: EKRNNSDIQA AVDSTRKELE EVKSNIGKAI SEVKTLKIIV GSLQSELERE KKDLSETKQR EALSVHRNSK EAREERCSEI AKKLQEANKE AEEATSLASA
501: AQEELRKAKE ESEEARTGVS AIESQLVEAK REMEAAKASE KLALAAIKAL QETEYSTKIE DISTPRSIII SVEEYYELSK QAHEVEEAAN KKLAEIVSQI
601: EVAKEEESRV LEKIEEVNRE TAFQREKLKE AMDKVEKARD KKVSMDHELR KWSSENGKRS PMSSPEGGEK ESHDLGKSKS ALHSARSFAF GEEGSNNVGD
701: SSNVTHETKK KKKRFSLLPK VFMFLSRKKS NK
001: MMDDDHKVSN DISLLPDLNF DSSSPFTSIE FDSSICDLLN LETGGDTPNL IPDHNPFFDS FDGLQEEEED SHFVVEPESP KVYIAPRVMI NHQDSFSLDS
101: RNDEYIEDVK ILPGSPGGIQ DLGLSRLKVP GSPRAFVHPR SSGSPRFVSP TSPVLIDTAA PFESVKEAVS KFGGITDWKA HKIQTIERRK TVDQELEKIQ
201: EDMPDYKKQA VVAEEAKHQV VMELERTRNV VEELKLELEK AEKEEQQAKQ DSDLAKLRVE EMEQGIAGEV SVAAKSQLEV AKARHLSAVS ELGTIREEIE
301: MVSNEYESLL TEKDLAAKKA EDSVLKAKDV EKQMEGLTME VIATKQLLEL AHATHLEAQE KKLDAAMARD QDVYNQEKEL KMVEDEIKRF RQDIDAADDV
401: KTKLKTASAL QQDLRAEIAA YKDSNMGKRN NSDIQAAVDS ARKELEEVIS NIEKANSEVK TLKIIVGSLQ SELAREKHDL SETRQRNRED TREEKCTEIA
501: KKLQEASREA EEAKSLAIAA REELRKAKEE SDEAKTGLSA VERQLMESKK EMEASRASEK LALAAIKALQ ETEYANKIED ISSSPKSIII SVEEYYELSK
601: QAHEVEEAAN RKLAEIVSKI EVAKEEESRI LENLEEVSRE TAIRKVELKE AMTKVEKARD GKVGMDHELR KWRSDNGNRS PEGGNKENLS KSKSALHQPT
701: TFTFGEQASS SNVTPQASSS NVTPETETKK KKKRFSLLPK VFMFLSRKKS SNK
101: RNDEYIEDVK ILPGSPGGIQ DLGLSRLKVP GSPRAFVHPR SSGSPRFVSP TSPVLIDTAA PFESVKEAVS KFGGITDWKA HKIQTIERRK TVDQELEKIQ
201: EDMPDYKKQA VVAEEAKHQV VMELERTRNV VEELKLELEK AEKEEQQAKQ DSDLAKLRVE EMEQGIAGEV SVAAKSQLEV AKARHLSAVS ELGTIREEIE
301: MVSNEYESLL TEKDLAAKKA EDSVLKAKDV EKQMEGLTME VIATKQLLEL AHATHLEAQE KKLDAAMARD QDVYNQEKEL KMVEDEIKRF RQDIDAADDV
401: KTKLKTASAL QQDLRAEIAA YKDSNMGKRN NSDIQAAVDS ARKELEEVIS NIEKANSEVK TLKIIVGSLQ SELAREKHDL SETRQRNRED TREEKCTEIA
501: KKLQEASREA EEAKSLAIAA REELRKAKEE SDEAKTGLSA VERQLMESKK EMEASRASEK LALAAIKALQ ETEYANKIED ISSSPKSIII SVEEYYELSK
601: QAHEVEEAAN RKLAEIVSKI EVAKEEESRI LENLEEVSRE TAIRKVELKE AMTKVEKARD GKVGMDHELR KWRSDNGNRS PEGGNKENLS KSKSALHQPT
701: TFTFGEQASS SNVTPQASSS NVTPETETKK KKKRFSLLPK VFMFLSRKKS SNK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.