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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033647.1-P Field mustard nucleus 92.16 71.71
CDY22380 Canola nucleus 91.09 71.07
AT5G42880.1 Thale cress nucleus 78.43 58.59
Solyc07g026880.1.1 Tomato cytosol 12.48 45.45
Bra014049.1-P Field mustard nucleus 60.25 44.83
Bra034308.1-P Field mustard nucleus 51.16 44.36
Bra040259.1-P Field mustard nucleus 56.68 43.44
Solyc05g042150.1.1 Tomato cytosol 14.08 41.15
Solyc04g078950.1.1 Tomato nucleus 22.1 40.66
KRH45361 Soybean nucleus 37.43 35.84
KRH07566 Soybean nucleus 38.5 35.12
VIT_18s0001g10560.t01 Wine grape nucleus 52.23 34.72
Solyc07g022910.2.1 Tomato plastid 51.69 34.24
Solyc12g088830.1.1 Tomato nucleus 49.38 32.86
PGSC0003DMT400039921 Potato nucleus 50.09 32.83
PGSC0003DMT400011385 Potato nucleus 51.34 31.89
TraesCS1D01G248300.1 Wheat nucleus, plastid 40.29 31.52
GSMUA_Achr6P10120_001 Banana nucleus 47.77 30.56
HORVU2Hr1G030630.1 Barley nucleus 41.35 29.26
TraesCS2A01G166400.1 Wheat cytosol 41.18 29.13
TraesCS1B01G259500.1 Wheat nucleus 39.57 29.06
Os03t0395300-01 Rice plasma membrane 40.11 28.99
KRH51982 Soybean nucleus 49.02 28.86
PGSC0003DMT400020677 Potato nucleus 49.73 28.76
TraesCS1A01G248800.1 Wheat nucleus 39.93 28.72
GSMUA_Achr5P17590_001 Banana nucleus 41.89 28.66
GSMUA_Achr10P... Banana cytosol 41.53 28.59
GSMUA_Achr9P27100_001 Banana nucleus 41.71 28.47
Zm00001d022161_P001 Maize nucleus 40.46 28.38
KRH61284 Soybean nucleus 48.84 28.16
TraesCS2B01G192300.1 Wheat nucleus 42.07 28.06
EER92167 Sorghum nucleus 39.22 28.06
Zm00001d029420_P002 Maize nucleus 39.04 27.93
KRH15355 Soybean nucleus 50.27 27.92
KXG36701 Sorghum nucleus 40.82 27.76
TraesCS2D01G173700.1 Wheat nucleus 41.53 27.71
Os07t0619100-01 Rice plasma membrane 40.29 27.66
Os06t0314000-01 Rice cytosol, nucleus 24.78 27.47
Zm00001d047240_P002 Maize nucleus 37.79 27.01
GSMUA_Achr5P24580_001 Banana cytosol 29.23 26.11
HORVU1Hr1G062330.8 Barley nucleus 41.18 25.55
TraesCS4B01G300400.1 Wheat nucleus 33.69 21.85
Solyc08g015840.1.1 Tomato cytosol 6.95 19.9
Bra026233.1-P Field mustard cytosol 18.18 19.58
Bra016786.1-P Field mustard cytosol 18.89 19.38
Bra002870.1-P Field mustard nucleus 22.1 18.99
Bra021064.1-P Field mustard cytosol 17.47 18.81
Bra028956.1-P Field mustard nucleus 21.39 18.63
Bra026987.1-P Field mustard cytosol 20.14 11.2
Protein Annotations
EnsemblPlants:Bra041137.1EnsemblPlants:Bra041137.1-PEnsemblPlantsGene:Bra041137InterPro:Webncoils:CoilPANTHER:PTHR32054
PANTHER:PTHR32054:SF2PFAM:PF05701SEG:segUniParc:UPI000253ED3EUniProt:M4FJ57MapMan:35.1
Description
AT5G42880 (E=2e-172) | unknown protein
Coordinates
chrScaffold000776:-:400..2085
Molecular Weight (calculated)
63466.5 Da
IEP (calculated)
4.575
GRAVY (calculated)
-0.906
Length
561 amino acids
Sequence
(BLAST)
001: MVDEELEKMQ EALPEYKRES ELAEEAKHDA LRELETTKGL IEELKLELEK AQLEEQQAKQ DSDLAQMRVE EMEKGVANEA SVAVKAQLEV AKARQESATC
101: ELRSVREEIE MVCNEYEDML REKDLAAERA EAAAKEAKEI EREMDGLSIE LIATKESLES AHTAHLEAEE KRFGAAMGRD QDMYNWEKEL KMVEDDIERL
201: NQETRAADDM KTRLDAASAL EYDLRAELAA FTESSTRMGN DDNIHAAVDS AKRELEEVKS NIEKAASEVK ALKIIAGSLQ SELARERQDL AETKERQSAA
301: GGLVRTSDEE AREELMDTSN KLEEAMKEAE DAKLLAAAAR DELRMAEELS EQAKTGMSTI ENRLTEAKKE MEAARASEKL ALAAIKALQE TESSQRFEEM
401: SNSPRSIIIS VEEYYELSKR AHESEEEANT KLSQIVSQIE VAKEEESRIL EKLEEVNREM SVRKGELKAA MGKAEKARDG KLSMEQELRK WRSENGKRRT
501: EEGMEPEKSP TRSSTFAFGE QGTSSNIDNN NVTPETKKKK KKKLSLLPKV LMFLSRKKSH K
Best Arabidopsis Sequence Match ( AT5G42880.1 )
(BLAST)
001: MLGDDKDSDD LNLFLNAIGE AGDEEGPTSF NDIDFLTFDD EDLHNPFQDC ETSPINEPPK VYVAPRVMIS HQDSFSEDSR TDVIEDARIL PASPRLRVPA
101: SPRAFVYPRS VESPRFGSPR SVESPCFGSP IGVIDTASPF ESVREAVSKF GGITDWKAHK IQTIERRKMV DEELEKIQEA MPEYKREAEL AEEAKYDALE
201: ELENTKGLIE ELKLELEKAE KEEQQAKQDS ELAQMRVEEM EKGVANEASV AVKTQLEVAK ARQVSATSEL RSVREEIEMV SNEYKDMLRE KELAAERADI
301: AVLEAKEIER TMDGLSIELI ATKELLESVH TAHLEAEEKR FSVAMARDQD VYNWEKELKM VENDIERLNQ EVRAADDVKA KLETASALQH DLKTELAAFT
401: DISSGNLLLE KNDIHAAVES ARRELEEVKA NIEKAASEVK KLKIIAGSLQ SELGRERQDL EETKQKESTG LARTNDKDAG EELVETAKKL EQATKEAEDA
501: KALATASRDE LRMAKELSEQ AKRGMSTIES RLVEAKKEME AARASEKLAL AAIKALQETE SSQRFEEINN SPRSIIISVE EYYELSKQAL ESEEEANTRL
601: SEIVSQIEVA KEEESRILEK LEEVNREMSV RKAELKEANG KAEKARDGKL GMEQELRKWR SENGKRRTDE GREPEKSPTR SSTEGRNKEN GFGQSKSFAF
701: GEQGSSSNNT GGSTTTNNNN LTPETKKKKK KLSLFPKVFM FLSRKKSHSH K
Arabidopsis Description
WEL3Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMN1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.