Factsheet for Bra034308.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034308.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26570.1	Bra034308.1-P	AT2G26570.1	20974974

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48180	Canola	nucleus	88.41	77.51
Solyc05g042150.1.1	Tomato	cytosol	18.39	61.98
AT2G26570.1	Thale cress	nucleus	76.97	61.71
Solyc07g026880.1.1	Tomato	cytosol	14.06	59.09
Solyc04g078950.1.1	Tomato	nucleus	24.57	52.13
Bra041137.1-P	Field mustard	nucleus	44.36	51.16
VIT_18s0001g10560.t01	Wine grape	nucleus	64.3	49.29
KRH07566	Soybean	nucleus	45.75	48.13
KRH45361	Soybean	nucleus	41.73	46.08
Solyc07g022910.2.1	Tomato	plastid	59.66	45.57
Solyc12g088830.1.1	Tomato	nucleus	59.04	45.31
PGSC0003DMT400039921	Potato	nucleus	59.51	44.98
PGSC0003DMT400011385	Potato	nucleus	62.44	44.74
Bra033647.1-P	Field mustard	nucleus	49.15	44.11
TraesCS1D01G248300.1	Wheat	nucleus, plastid	47.76	43.1
Solyc08g015840.1.1	Tomato	cytosol	12.98	42.86
KRH51982	Soybean	nucleus	61.36	41.66
KRH61284	Soybean	nucleus	62.29	41.42
GSMUA_Achr6P10120_001	Banana	nucleus	55.33	40.82
Os03t0395300-01	Rice	plasma membrane	48.84	40.72
Bra014049.1-P	Field mustard	nucleus	47.45	40.72
TraesCS1B01G259500.1	Wheat	nucleus	47.6	40.31
HORVU2Hr1G030630.1	Barley	nucleus	49.15	40.1
PGSC0003DMT400020677	Potato	nucleus	59.97	40.0
TraesCS2A01G166400.1	Wheat	cytosol	48.84	39.85
Bra040259.1-P	Field mustard	nucleus	44.82	39.62
KRH15355	Soybean	nucleus	61.67	39.51
TraesCS1A01G248800.1	Wheat	nucleus	47.3	39.23
EER92167	Sorghum	nucleus	47.45	39.16
Zm00001d029420_P002	Maize	nucleus	47.14	38.9
GSMUA_Achr5P17590_001	Banana	nucleus	49.15	38.78
GSMUA_Achr10P...	Banana	cytosol	48.84	38.77
GSMUA_Achr9P27100_001	Banana	nucleus	48.84	38.44
TraesCS2B01G192300.1	Wheat	nucleus	49.46	38.05
Zm00001d022161_P001	Maize	nucleus	46.83	37.88
Zm00001d047240_P002	Maize	nucleus	45.75	37.71
TraesCS2D01G173700.1	Wheat	nucleus	49.0	37.69
KXG36701	Sorghum	nucleus	47.91	37.58
Os06t0314000-01	Rice	cytosol, nucleus	28.75	36.76
Os07t0619100-01	Rice	plasma membrane	46.21	36.6
GSMUA_Achr5P24580_001	Banana	cytosol	35.09	36.15
HORVU1Hr1G062330.8	Barley	nucleus	47.76	34.18
TraesCS4B01G300400.1	Wheat	nucleus	39.1	29.25
Bra002870.1-P	Field mustard	nucleus	24.88	24.66
Bra028956.1-P	Field mustard	nucleus	23.49	23.6
Bra016786.1-P	Field mustard	cytosol	18.24	21.57
Bra026233.1-P	Field mustard	cytosol	16.85	20.92
Bra021064.1-P	Field mustard	cytosol	16.07	19.96
Bra026987.1-P	Field mustard	cytosol	19.01	12.19

Protein Annotations

MapMan:20.5.8.1	EnsemblPlantsGene:Bra034308	EnsemblPlants:Bra034308.1	EnsemblPlants:Bra034308.1-P	ncoils:Coil	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0008150
GO:GO:0009903	GO:GO:0009904	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	UniProt:M4EZR5
PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF2	UniParc:UPI00025452BD	InterPro:Web	SEG:seg

Description

AT2G26570 (E=6e-192) | unknown protein

Coordinates

chrA04:-:11810645..11812588

Molecular Weight (calculated)

72361.9 Da

IEP (calculated)

5.098

GRAVY (calculated)

-0.841

Length

647 amino acids

Sequence
(BLAST)

001: MITEGTSRNG GTSSSSHGSP VDSHRGLIDT AAPFESVKEA VSKFGGITDW KSHRIQTVER RKLIEEELKK IQEEIPEYRT HSETAEAEKL QVLKELETTK
101: RLIEQLKLNL EKAQTEEQQA KQDSELAKLR VEEMEQGITD DVSVAAKAQL EVAKARHTSA VTELRSVKEE LETLRSEYDA LVKDRDESVK KVEEAMSVSK
201: EVEKRVEELT IELIATKESL ESAHASHLEA EEQRIGAAMA RDQDAHRWEK ELKQAEEQVQ KLNQEILSSK DLKSKLDTAS ALLLDLKAEL VAYMESKLNQ
301: EARDLPSESH HDASKKELED VKTSIEKAAA EVNCLKVASE SLQLELEKEK SAVASVKQRE GMASIAVASL EAEIERTKSE IALVQCKEKE SRDKMVELPK
401: QLQQAAEEAD EAKFLSERAR EELRKAKEEA EQAKAGASTM ESRLFAAQKE IEAAKASERL ALAAIKALEE SGSTSKDNDV VTLSLEEYYE LSKRAHEAEE
501: AANERVAAAV SRIEEAKEAE TRSLEKLEEV NRDMNARKKS LKEATEKAEK AKEGKLGVEQ ELRKWRAEHE QKRKVGGDTE KIIRASSAGA NELSKLAQSP
601: EVYSPSESYG TEDNSETSQL PPSKTGKKKK LSLPRFFMFL SKKKSHN

Best Arabidopsis Sequence Match ( AT2G26570.1 )
(BLAST)

001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN

Arabidopsis Description

WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.