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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21038 Canola cytosol 98.72 98.72
AT1G12150.2 Thale cress cytosol 81.35 81.2
Bra026987.1-P Field mustard cytosol 80.44 43.61
KRH36620 Soybean cytosol, mitochondrion, nucleus 42.6 40.38
KRH51206 Soybean cytosol 40.59 40.36
KRH01945 Soybean cytosol, mitochondrion, nucleus 41.86 39.9
KRH11615 Soybean cytosol, mitochondrion, nucleus 41.32 39.24
Bra021064.1-P Field mustard cytosol 36.2 38.0
Bra026233.1-P Field mustard cytosol 34.37 36.08
GSMUA_Achr7P16580_001 Banana cytosol 39.85 35.39
GSMUA_Achr4P18510_001 Banana nucleus 37.84 33.77
Os12t0271600-01 Rice plasma membrane 38.57 32.61
OQU79020 Sorghum nucleus 38.76 32.57
TraesCS4B01G127500.1 Wheat nucleus 37.48 32.33
TraesCS4A01G188200.1 Wheat nucleus 37.48 32.23
TraesCS4D01G125200.1 Wheat nucleus 37.29 32.18
Zm00001d023629_P001 Maize nucleus 38.03 31.9
TraesCS5A01G098800.2 Wheat cytosol 36.93 31.61
TraesCS5B01G103500.1 Wheat nucleus 36.75 31.46
TraesCS5D01G110400.2 Wheat cytosol 36.56 31.3
Zm00001d041088_P004 Maize nucleus 36.75 30.97
Solyc04g015110.2.1 Tomato plastid 35.1 30.82
Bra002870.1-P Field mustard nucleus 36.75 30.78
PGSC0003DMT400050839 Potato nucleus 34.92 30.76
Bra028956.1-P Field mustard nucleus 36.2 30.75
HORVU5Hr1G029890.1 Barley nucleus 36.01 30.54
PGSC0003DMT400034621 Potato mitochondrion, plastid 24.13 29.27
GSMUA_AchrUn_... Banana nucleus 32.18 27.8
Bra041137.1-P Field mustard nucleus 19.38 18.89
Bra034308.1-P Field mustard nucleus 21.57 18.24
Bra033647.1-P Field mustard nucleus 22.3 16.92
Bra040259.1-P Field mustard nucleus 21.02 15.71
Bra014049.1-P Field mustard nucleus 21.57 15.65
Protein Annotations
EnsemblPlants:Bra016786.1EnsemblPlants:Bra016786.1-PEnsemblPlantsGene:Bra016786InterPro:Webncoils:CoilPANTHER:PTHR32054
PANTHER:PTHR32054:SF20PFAM:PF05701SEG:segUniParc:UPI0002546213UniProt:M4DJV8MapMan:35.1
Description
AT1G12150 (E=1e-206) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G17210.1); Has 136823 Blast hits to 68042 proteins in 2292 species: Archae - 1576; Bacteria - 22165; Metazoa - 64188; Fungi - 9966; Plants - 5333; Viruses - 600; Other Eukaryotes - 32995 (source: NCBI BLink).
Coordinates
chrA08:+:19974686..19976432
Molecular Weight (calculated)
62455.7 Da
IEP (calculated)
5.354
GRAVY (calculated)
-0.961
Length
547 amino acids
Sequence
(BLAST)
001: MVNIRVQQKG PESPRTSEVG EIDTRAPFQS VKAAVSLFGE VVSRQRSTPR RSRLSSESVT DKETQLMLAH KQFIKIKQKL DNSEITRSRA LSDLSKAKKT
101: MEELRTKLET VNKSKQSAID TKETVQQREE QLEHDKSQGS SPPHHHELDV ARERYLSTTV ELDAAKQKLN KIKQSFDSAL DFKATALNQA AEAKRAIQVN
201: SAKVSELSKE ITDMKDAIHQ LKLAATQNQQ EYGSIVKEKD DLRECYKTAV EEAEKKLLVL RKEYEPELSR TLEGKLIETT SEIESLREEM KKAHESEMNT
301: VKVITNELNE ATTRLQEASD EECSLRSLVN SIRMELDDMR REREEMEKRE AERLEVEERK KVEALKEESL KLEEMKLEAS RARNEAEEMN RKIESLKKET
401: DSAMIAAEEA EKRLEIVIRE VEQAKAADEK VREEMKIISQ KKESKKQDES SSKIKITVQE YESLKRGAGE TETVAEKKLA DIAAELEEIN ARKAEADTKL
501: GASLKAIEEM NHATELAQKS AESAEAAKSM VESELNRWRQ QENVQHD
Best Arabidopsis Sequence Match ( AT1G12150.2 )
(BLAST)
001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
Arabidopsis Description
WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.