Factsheet for GSMUA_Achr7P16580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P18510_001	Banana	nucleus	78.08	78.47
Os12t0271600-01	Rice	plasma membrane	58.77	55.95
OQU79020	Sorghum	nucleus	58.44	55.3
GSMUA_AchrUn_...	Banana	nucleus	55.84	54.34
Zm00001d023629_P001	Maize	nucleus	57.14	53.99
Zm00001d041088_P004	Maize	nucleus	56.49	53.62
VIT_19s0015g00740.t01	Wine grape	nucleus	56.01	53.08
TraesCS4A01G188200.1	Wheat	nucleus	53.9	52.2
KRH75103	Soybean	nucleus	20.29	52.08
TraesCS4D01G125200.1	Wheat	nucleus	53.57	52.05
TraesCS4B01G127500.1	Wheat	nucleus	53.41	51.89
TraesCS5B01G103500.1	Wheat	nucleus	53.41	51.49
TraesCS5D01G110400.2	Wheat	cytosol	53.25	51.33
TraesCS5A01G098800.2	Wheat	cytosol	52.92	51.02
HORVU5Hr1G029890.1	Barley	nucleus	53.41	51.01
KRH46399	Soybean	cytosol	53.73	50.69
KRG98464	Soybean	mitochondrion	53.73	50.69
Solyc07g065680.2.1	Tomato	nucleus	54.55	49.78
PGSC0003DMT400057359	Potato	nucleus	54.55	49.78
CDY28631	Canola	nucleus	48.38	45.71
Bra028956.1-P	Field mustard	nucleus	47.73	45.65
Bra002870.1-P	Field mustard	nucleus	48.38	45.64
CDY36768	Canola	nucleus	47.73	45.58
CDY11973	Canola	nucleus	47.56	45.57
CDY17364	Canola	nucleus	48.21	45.48
AT5G55860.1	Thale cress	nucleus	47.73	45.3
CDY11974	Canola	cytosol, nucleus, plastid	20.45	43.45
KRH73920	Soybean	nucleus	45.13	42.84
AT1G12150.2	Thale cress	cytosol	35.88	40.33
Bra016786.1-P	Field mustard	cytosol	35.39	39.85
CDY31245	Canola	cytosol	35.39	39.78
CDY21038	Canola	cytosol	35.23	39.67
KRH11615	Soybean	cytosol, mitochondrion, nucleus	36.04	38.54
KRH36620	Soybean	cytosol, mitochondrion, nucleus	35.39	37.78
KRH51206	Soybean	cytosol	33.44	37.45
KRH01945	Soybean	cytosol, mitochondrion, nucleus	33.93	36.41
PGSC0003DMT400050839	Potato	nucleus	35.88	35.59
PGSC0003DMT400034621	Potato	mitochondrion, plastid	25.97	35.48
Solyc04g015110.2.1	Tomato	plastid	35.88	35.47
Bra026233.1-P	Field mustard	cytosol	25.81	30.52
CDY42964	Canola	cytosol	25.65	30.38
CDY58167	Canola	cytosol	25.49	30.19
CDY50127	Canola	cytosol	25.32	29.83
CDY35594	Canola	nucleus	25.16	29.64
CDX90485	Canola	cytosol	25.49	29.62
CDY09639	Canola	cytosol	25.49	29.57
Bra021064.1-P	Field mustard	cytosol	24.68	29.17
AT4G17210.1	Thale cress	cytosol, plastid	24.84	29.03
CDY15972	Canola	cytosol	35.23	24.19
CDY26542	Canola	cytosol	35.06	21.41
Bra026987.1-P	Field mustard	cytosol	34.9	21.31
GSMUA_Achr9P27100_001	Banana	nucleus	22.73	17.03
GSMUA_Achr6P10120_001	Banana	nucleus	23.21	16.31
GSMUA_Achr5P17590_001	Banana	nucleus	21.59	16.22
GSMUA_Achr5P24580_001	Banana	cytosol	16.4	16.08
GSMUA_Achr10P...	Banana	cytosol	21.27	16.07

Protein Annotations

EnsemblPlants:GSMUA_Achr7P16580_001	EnsemblPlants:GSMUA_Achr7T16580_001	EnsemblPlantsGene:GSMUA_Achr7G16580_001	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054
PANTHER:PTHR32054:SF3	PFAM:PF05701	SEG:seg	UniParc:UPI000295A520	UniProt:M0TI45	MapMan:35.1

Description

prefoldin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G16580_001]

Coordinates

chr7:+:14827451..14830546

Molecular Weight (calculated)

68509.9 Da

IEP (calculated)

5.051

GRAVY (calculated)

-0.743

Length

616 amino acids

Sequence
(BLAST)

001: MGTKVQQNSI DSPKAEIDTR APFESVKAAV SLFGEVAFAS DRSTARKPKP PLIERALPKE TQLHLAKKEF NKYKEQLNNA DITRIQALAE LERVKRTVEE
101: LTNKLSTLNE SKEQALKATE AADSQTKKLE DVSSVESTTR KDAGWEQEFD NAREQYAAAI TEIDAAKQEL RRIKKDFETS MEGKLTAIQQ EAESKRLFDA
201: NTEKVAQLSK EISAAQESLM HVKLAADQAR QEESKIHIDK DTAKLSYKQA LEETEKKLAS LKKEFDPEVH YMLEAKLAET TAEIGAVQKE MEDTRTSDLE
301: FVTTVTCELD GAKEMLQKLA EEESSLRSLV ESLKLELEGL KKEHEELKEK DAETESVVVS TLQQLSSESQ NALQEAEEMK KSAEELRADS EAAQTTLHEA
401: EKKLQVALKD AEEAKAAEAR VLDLIKELSE KANVARASTS ESGANITISK EEYESLTRKV EESGKLAEMK VAAAIAQVDA VRASENEAVK KLDAARKEME
501: DIETATEEAL KRAEMAEAAK KAVEGELRRW REKEQKMAAK TASRILAETQ MLAEALPPKP MVHSAKGVEK TEENRKVVRP TVSKKALLPN LSGIFHRKKN
601: QVDGGSPSHL PAEKPV

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.