CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11615	Soybean	cytosol, mitochondrion, nucleus	85.27	85.42
KRH51206	Soybean	cytosol	55.29	58.0
KRH01945	Soybean	cytosol, mitochondrion, nucleus	57.37	57.67
AT1G12150.2	Thale cress	cytosol	42.63	44.89
CDY31245	Canola	cytosol	41.77	43.98
CDY21038	Canola	cytosol	40.73	42.96
Bra016786.1-P	Field mustard	cytosol	40.38	42.6
PGSC0003DMT400050839	Potato	nucleus	40.21	37.36
Solyc04g015110.2.1	Tomato	plastid	39.17	36.28
OQU79020	Sorghum	nucleus	40.9	36.25
KRG98464	Soybean	mitochondrion	40.73	35.99
Zm00001d041088_P004	Maize	nucleus	40.38	35.9
Os12t0271600-01	Rice	plasma membrane	40.03	35.7
KRH46399	Soybean	cytosol	40.38	35.68
TraesCS4B01G127500.1	Wheat	nucleus	39.17	35.65
Zm00001d023629_P001	Maize	nucleus	40.21	35.58
PGSC0003DMT400034621	Potato	mitochondrion, plastid	27.73	35.48
GSMUA_Achr7P16580_001	Banana	cytosol	37.78	35.39
TraesCS4D01G125200.1	Wheat	nucleus	38.82	35.33
GSMUA_Achr4P18510_001	Banana	nucleus	37.44	35.24
TraesCS4A01G188200.1	Wheat	nucleus	38.65	35.06
TraesCS5B01G103500.1	Wheat	nucleus	38.65	34.9
TraesCS5A01G098800.2	Wheat	cytosol	38.47	34.74
TraesCS5D01G110400.2	Wheat	cytosol	38.3	34.59
KRH73920	Soybean	nucleus	38.82	34.51
Bra026233.1-P	Field mustard	cytosol	30.85	34.17
AT4G17210.1	Thale cress	cytosol, plastid	31.2	34.16
CDY42964	Canola	cytosol	30.68	34.04
CDY09639	Canola	cytosol	31.2	33.9
CDY58167	Canola	cytosol	30.5	33.85
HORVU5Hr1G029890.1	Barley	nucleus	37.61	33.64
CDX90485	Canola	cytosol	30.85	33.58
Bra021064.1-P	Field mustard	cytosol	30.16	33.4
GSMUA_AchrUn_...	Banana	nucleus	36.22	33.02
CDY35594	Canola	nucleus	29.64	32.7
CDY50127	Canola	cytosol	29.46	32.5
KRH75103	Soybean	nucleus	12.48	30.0
CDY15972	Canola	cytosol	41.77	26.87
Bra026987.1-P	Field mustard	cytosol	42.29	24.18
CDY26542	Canola	cytosol	41.07	23.49
KRH07566	Soybean	nucleus	20.45	19.19
KRH45361	Soybean	nucleus	19.24	18.94
KRH61284	Soybean	nucleus	25.65	15.21
KRH51982	Soybean	nucleus	24.96	15.11
KRH15355	Soybean	nucleus	24.78	14.16

Protein Annotations

EntrezGene:100776481	MapMan:35.1	EMBL:ACUP02005384	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G015000	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	UniProt:I1L046	EnsemblPlants:KRH36620	ProteinID:KRH36620
ProteinID:KRH36620.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF20	UniParc:UPI0002337D2F	InterPro:Web
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:1151218..1154437

Molecular Weight (calculated)

65626.0 Da

IEP (calculated)

4.722

GRAVY (calculated)

-0.924

Length

577 amino acids

Sequence
(BLAST)

001: MSFRIRDQER GTDSPREAGE IDTRAPFQSV KAAVSLFGEV AVSKEKHSIK RRSSENVLEK ETQLLLAQRE LNKIKKQLES AENTRSKTLS ELDKAKVTLQ
101: ELTKKLNSVR ESKQSAIEAA EAVKNQAKEL EQALSQKAIG YEAWKQELEH ARKEYKTTVK ELDASKQELN KIRQDFDIAL EAKLAAFQTA GEAQRSAKLN
201: SEKLHELKNQ IATMKEQIEH LKLASSQAEE DQAKIMRERE AQQSFYENAK EEAQNKLITL KNEYEPELTQ SLEAKLAETS EEIQVLQEQM KEAHASEMDS
301: VRRITLEIKE ATKTLQEVAE EENSLRNLVD SLSTELEQVK KEQEELKEKE KAAEALAVDL TDQLQSKPGD TMEKESDKID EIELKIKHLS FETETARREE
401: EEMRSKTQEL KQEAEKSKAV AEELEKKLEL YLKQAEGAKA SEQRAIEEMK MMSDSDNNTQ DTVSVADSNG KIVLTVDEFA ALSGKIKESE DMIDRTETAA
501: MAQVEAINTR RNEVDRKVEA NLKAIEEIKA ATDMALRNAE MADSAKVAVE GELRKWRQEE QNMDYSDNSS RPISLRI

Best Arabidopsis Sequence Match ( AT1G12150.2 )
(BLAST)

001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA

Arabidopsis Description

WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.