Factsheet for PGSC0003DMT400034621

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050839	Potato	nucleus	50.11	36.39
KRH51206	Soybean	cytosol	33.92	27.82
KRH36620	Soybean	cytosol, mitochondrion, nucleus	35.48	27.73
KRH11615	Soybean	cytosol, mitochondrion, nucleus	35.03	27.43
Os12t0271600-01	Rice	plasma membrane	38.36	26.74
KRH01945	Soybean	cytosol, mitochondrion, nucleus	33.7	26.48
OQU79020	Sorghum	nucleus	37.92	26.27
TraesCS5B01G103500.1	Wheat	nucleus	36.81	25.98
GSMUA_Achr7P16580_001	Banana	cytosol	35.48	25.97
Zm00001d023629_P001	Maize	nucleus	37.47	25.92
Zm00001d041088_P004	Maize	nucleus	37.25	25.89
TraesCS5A01G098800.2	Wheat	cytosol	36.59	25.82
TraesCS4B01G127500.1	Wheat	nucleus	35.7	25.39
TraesCS4A01G188200.1	Wheat	nucleus	35.7	25.31
HORVU5Hr1G029890.1	Barley	nucleus	36.14	25.27
TraesCS4D01G125200.1	Wheat	nucleus	35.48	25.24
TraesCS5D01G110400.2	Wheat	cytosol	35.48	25.04
PGSC0003DMT400057359	Potato	nucleus	37.03	24.74
GSMUA_Achr4P18510_001	Banana	nucleus	33.26	24.47
AT1G12150.2	Thale cress	cytosol	29.49	24.27
Bra016786.1-P	Field mustard	cytosol	29.27	24.13
CDY21038	Canola	cytosol	29.27	24.13
CDY31245	Canola	cytosol	29.27	24.09
AT4G17210.1	Thale cress	cytosol, plastid	26.16	22.39
CDY58167	Canola	cytosol	25.28	21.92
CDY50127	Canola	cytosol	25.28	21.8
CDX90485	Canola	cytosol	25.5	21.7
CDY09639	Canola	cytosol	25.5	21.66
CDY42964	Canola	cytosol	24.83	21.54
GSMUA_AchrUn_...	Banana	nucleus	30.16	21.48
CDY35594	Canola	nucleus	24.83	21.41
Bra026233.1-P	Field mustard	cytosol	24.61	21.31
Bra021064.1-P	Field mustard	cytosol	24.17	20.92
CDY15972	Canola	cytosol	29.71	14.94
Bra026987.1-P	Field mustard	cytosol	29.49	13.18
CDY26542	Canola	cytosol	29.27	13.08
PGSC0003DMT400039921	Potato	nucleus	24.39	12.85
PGSC0003DMT400011385	Potato	nucleus	23.5	11.74
PGSC0003DMT400020677	Potato	nucleus	23.73	11.03

Protein Annotations

EnsemblPlants:PGSC0003DMT400034621	EnsemblPlantsGene:PGSC0003DMG402013304	EntrezGene:102583542	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054
PANTHER:PTHR32054:SF3	PFAM:PF05701	PGSC:PGSC0003DMG402013304	RefSeq:XP_006352315.1	SEG:seg	UniParc:UPI000296B9B3
UniProt:M1B111	MapMan:35.2	:	:	:	:

Description

Myosin heavy chain [Source:PGSC_GENE;Acc:PGSC0003DMG402013304]

Coordinates

chr11:-:156328..161955

Molecular Weight (calculated)

50113.3 Da

IEP (calculated)

9.416

GRAVY (calculated)

-0.719

Length

451 amino acids

Sequence
(BLAST)

001: MLRNRRQNGG SPRYTSSPTS SPSGSPRIIV TRSIGGSPTS RHEVGEIDTR SPFQSVKAAV TLFGETGTSG CSPKKATNKP ISTFKKSKTA EEEKESQLNL
101: ALREVDSFKQ QIRSTETTKG HALRELQNAK TTLQELTSQL QTLYKSKKAA LQETQAANAR ATQLQVTIAD SMQSLRKAKE EAIFHSHLQE TNKGIQVLQE
201: QLHNVRASDL DSFTKTTSQL HLTKNTFQDI VAEERSLRSL VDSLQAELDT LKGHNSQFKV KADEAEALAE NLRVSLDNSK PKGDAIQQFT CEAVQFLKEA
301: EEMKKRVESI RQEAVTAQVA ANEAEERLKL ALREAEEAKA AETLASDQIH LTEDGKIKLA VEKYKAFSKK VEEIRNEADT KVAAAMAQVE DITANEKELL
401: MKVEAGLEEK QDMEVAIKEA LKTTEMAEAA KKAVEGQLRK KSSRKRSWRI F

Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)

001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF

Arabidopsis Description

WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.