Factsheet for TraesCS5D01G110400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G103500.1	Wheat	nucleus	91.71	91.71
TraesCS5A01G098800.2	Wheat	cytosol	91.71	91.71
HORVU5Hr1G029890.1	Barley	nucleus	87.64	86.82
OQU79020	Sorghum	nucleus	77.31	75.88
Os12t0271600-01	Rice	plasma membrane	76.06	75.12
Zm00001d041088_P004	Maize	nucleus	74.8	73.65
Zm00001d023629_P001	Maize	nucleus	72.93	71.47
TraesCS4D01G125200.1	Wheat	nucleus	67.61	68.14
GSMUA_Achr4P18510_001	Banana	nucleus	53.05	55.3
GSMUA_Achr7P16580_001	Banana	cytosol	51.33	53.25
VIT_19s0015g00740.t01	Wine grape	nucleus	48.04	47.23
KRG98464	Soybean	mitochondrion	47.42	46.4
GSMUA_AchrUn_...	Banana	nucleus	45.85	46.29
KRH46399	Soybean	cytosol	47.1	46.09
Solyc07g065680.2.1	Tomato	nucleus	46.64	44.15
PGSC0003DMT400057359	Potato	nucleus	46.48	44.0
CDY28631	Canola	nucleus	43.82	42.94
KRH75103	Soybean	nucleus	16.12	42.92
AT5G55860.1	Thale cress	nucleus	43.51	42.84
CDY17364	Canola	nucleus	43.51	42.57
Bra002870.1-P	Field mustard	nucleus	43.51	42.57
KRH73920	Soybean	nucleus	42.57	41.91
CDY36768	Canola	nucleus	41.31	40.93
CDY11973	Canola	nucleus	41.0	40.75
Bra028956.1-P	Field mustard	nucleus	41.0	40.68
CDY11974	Canola	cytosol, nucleus, plastid	18.0	39.66
KRH11615	Soybean	cytosol, mitochondrion, nucleus	34.74	38.54
KRH36620	Soybean	cytosol, mitochondrion, nucleus	34.59	38.3
KRH51206	Soybean	cytosol	32.55	37.82
AT1G12150.2	Thale cress	cytosol	31.61	36.86
CDY31245	Canola	cytosol	31.46	36.68
Bra016786.1-P	Field mustard	cytosol	31.3	36.56
KRH01945	Soybean	cytosol, mitochondrion, nucleus	32.71	36.41
CDY21038	Canola	cytosol	31.14	36.38
PGSC0003DMT400034621	Potato	mitochondrion, plastid	25.04	35.48
PGSC0003DMT400050839	Potato	nucleus	34.27	35.27
Solyc04g015110.2.1	Tomato	plastid	34.27	35.15
CDY35594	Canola	nucleus	24.41	29.83
CDX90485	Canola	cytosol	24.73	29.81
CDY42964	Canola	cytosol	24.26	29.81
CDY09639	Canola	cytosol	24.57	29.57
Bra026233.1-P	Field mustard	cytosol	24.1	29.56
CDY58167	Canola	cytosol	23.32	28.65
CDY50127	Canola	cytosol	23.32	28.49
AT4G17210.1	Thale cress	cytosol, plastid	23.32	28.27
Bra021064.1-P	Field mustard	cytosol	22.54	27.64
CDY15972	Canola	cytosol	30.67	21.85
TraesCS1D01G248300.1	Wheat	nucleus, plastid	23.79	21.2
Bra026987.1-P	Field mustard	cytosol	31.14	19.72
CDY26542	Canola	cytosol	30.99	19.62
TraesCS2D01G173700.1	Wheat	nucleus	25.04	19.02
TraesCS5D01G245400.1	Wheat	cytosol	20.81	16.86

Protein Annotations

EnsemblPlants:TraesCS5D01G110400.2	EnsemblPlantsGene:TraesCS5D01G110400	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF3
PFAM:PF05701	SEG:seg	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:+:125506002..125509808

Molecular Weight (calculated)

70782.5 Da

IEP (calculated)

5.297

GRAVY (calculated)

-0.774

Length

639 amino acids

Sequence
(BLAST)

001: MATKVRPPST DAEKLEVGEI DTRAPFESVK AAVSLFGEVR FSSDKSAARK PKAPQAEQKV LAKETELHLA QKELNKYREQ LSNAETARLQ SLSELEKARK
101: TVDELTTKLD AINKSKEMAI QATEDTKTRT KQLEVGSPKE AVRKDSPLKQ ELDSARQQYA VALADLDAAK QELRKLKKDF ETSLDMRLSA AQKEEESLHS
201: IEANKEKAAQ LRNEAKAIQE SLMHMKADTE QLHEEESQVL VEKDVARNAY KQALEETEKK LSYLRNEFDP AAYKTLKEKL DETNSEISSM QKKIEDARAL
301: DLETVAAITT ELDDAKEMLQ KVAEEESTLW NLVESLKLEL AAGKQDHSQL KEKDTDTESI VADLHAKLQK CKSELEVAVC AESEAATASD DLMLALQQLS
401: CESKTALQEA EMMQKSAAEL RIEAEAARVA LTEAEERLQS ALKEAEEAKA AEAKALDQIK QLSDRASAVQ ASTSEPGGKV TISKAEFESL SRKVKESEKL
501: SEMKVAAAMA QVEAVRASEN EAIQKMKTAR REMEDMELAT EEALKRAETA EAAKKAVEGE LKRWREKEQK KAAESVSSAE AQAHATTLSS VHKAPAGKPT
601: EKNDGHQRNN RTLLRKGFVL PNITGMFHKK KGHADGSSP

Best Arabidopsis Sequence Match ( AT1G12150.1 )
(BLAST)

001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA

Arabidopsis Description

WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.