Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42964 | Canola | cytosol | 87.19 | 87.69 |
| CDY50127 | Canola | cytosol | 75.53 | 75.53 |
| CDX90485 | Canola | cytosol | 75.53 | 74.53 |
| CDY09639 | Canola | cytosol | 74.76 | 73.63 |
| CDY58167 | Canola | cytosol | 72.85 | 73.27 |
| AT4G17210.1 | Thale cress | cytosol, plastid | 71.32 | 70.78 |
| CDY21038 | Canola | cytosol | 35.76 | 34.19 |
| CDY31245 | Canola | cytosol | 34.42 | 32.85 |
| KRH51206 | Soybean | cytosol | 31.93 | 30.36 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 33.08 | 30.14 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 33.08 | 30.03 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 32.7 | 29.64 |
| OQU79020 | Sorghum | nucleus | 32.7 | 26.27 |
| Os12t0271600-01 | Rice | plasma membrane | 32.12 | 25.97 |
| Zm00001d023629_P001 | Maize | nucleus | 32.31 | 25.92 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 30.98 | 25.55 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 14.15 | 25.52 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 30.98 | 25.47 |
| Zm00001d041088_P004 | Maize | nucleus | 31.55 | 25.42 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 30.78 | 25.39 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 29.64 | 25.16 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 21.41 | 24.83 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 29.06 | 24.8 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 29.83 | 24.41 |
| PGSC0003DMT400050839 | Potato | nucleus | 28.87 | 24.32 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 29.64 | 24.26 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 29.45 | 24.1 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 29.45 | 23.88 |
| Solyc04g015110.2.1 | Tomato | plastid | 28.11 | 23.6 |
| CDY17364 | Canola | nucleus | 28.11 | 22.51 |
| CDY28631 | Canola | nucleus | 27.53 | 22.09 |
| CDY36768 | Canola | nucleus | 26.58 | 21.55 |
| CDY11973 | Canola | nucleus | 26.2 | 21.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.67 | 20.38 |
| CDY15972 | Canola | cytosol | 34.61 | 20.18 |
| CDY26542 | Canola | cytosol | 34.61 | 17.94 |
| CDY22380 | Canola | nucleus | 21.99 | 15.99 |
| CDX71526 | Canola | nucleus | 21.99 | 15.88 |
| CDY48180 | Canola | nucleus | 21.61 | 15.31 |
| CDY43212 | Canola | nucleus | 20.46 | 14.99 |
| CDY46119 | Canola | nucleus | 19.12 | 14.73 |
| CDX77048 | Canola | nucleus | 21.22 | 14.66 |
| CDY17054 | Canola | nucleus | 19.89 | 14.65 |
| CDX72400 | Canola | nucleus | 18.74 | 14.41 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 22.18 | 14.39 |
| CDY62582 | Canola | nucleus | 19.31 | 13.8 |
| CDY17108 | Canola | nucleus | 19.12 | 13.68 |
| CDY35593 | Canola | cytosol | 6.88 | 10.68 |
Protein Annotations
| EnsemblPlants:CDY35594 | EnsemblPlantsGene:GSBRNA2T00058948001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF20 |
| PFAM:PF05701 | ProteinID:CDY35594 | ProteinID:CDY35594.1 | SEG:seg | UniParc:UPI0004EF1B39 | UniProt:A0A078HDV0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC01g21160DBnaC01g21160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDV0]
Coordinates
chrLK032356:+:88583..90226
Molecular Weight (calculated)
60385.9 Da
IEP (calculated)
4.650
GRAVY (calculated)
-1.016
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRADAPVMP LETPPRSSEV GEIDTHPPFQ SVRAAVSLFR QVSFSKQQPP SLSSSSQDST DVPDKETQLL LAEQEMNRVH LCRDSSVNAK ARALSDLDSA
101: QRKAADLRDK LETTKQSRKC AIQTKHTMNQ RLEKLQSQSQ ETESVRESYI LATAELFMAK EKLTEIGQEF SISVEERLSE LQRAEEAECS SMVNSQKIND
201: MLKEIAEMRD TAERLNSDAD KKKEEEAKIN EKSIDAKETY ADMKREAEKR LEDLRQDCDP ELRKEIDELA EISAENESLQ REIKLSRDLK EAKSAMQEIY
301: NEERSYKSLV ISLTVELDGM QRENRDLKEK EKEKDREEVE EGEWVEERLK VEETMRVAER TRQEAEETRM HVDELRREAA ATHTVMGEAA KQLEIVRRAV
401: KKAKTAEKRA VEDMTVLTEK KESLTHDDPD KKIRISLKEH EELRGKHEES ERMVQYKAET VDAQLEEINE SRVEGESMLE EKMKEMEQVK EATDTALRSA
501: EIAEEAHCIV DAELRKWKPE ELQ
101: QRKAADLRDK LETTKQSRKC AIQTKHTMNQ RLEKLQSQSQ ETESVRESYI LATAELFMAK EKLTEIGQEF SISVEERLSE LQRAEEAECS SMVNSQKIND
201: MLKEIAEMRD TAERLNSDAD KKKEEEAKIN EKSIDAKETY ADMKREAEKR LEDLRQDCDP ELRKEIDELA EISAENESLQ REIKLSRDLK EAKSAMQEIY
301: NEERSYKSLV ISLTVELDGM QRENRDLKEK EKEKDREEVE EGEWVEERLK VEETMRVAER TRQEAEETRM HVDELRREAA ATHTVMGEAA KQLEIVRRAV
401: KKAKTAEKRA VEDMTVLTEK KESLTHDDPD KKIRISLKEH EELRGKHEES ERMVQYKAET VDAQLEEINE SRVEGESMLE EKMKEMEQVK EATDTALRSA
501: EIAEEAHCIV DAELRKWKPE ELQ
001: MAKIRTDAPV MPPETPPRSS EVGEIDTRAP FQSVRDALSL FRQVSFSKKQ PPRLSSSSSS QSQDTTTDVS DKEMQLLLAE QEMDRVKICL DGSVAAKAQA
101: LSDLDSAQRK AADLRVKLES IKHSRKCAIS TKHTMNQRLE QLQSENQETE STREDYILIT AELFMAKYEL AELKQQFNLS VEERLAELQR AEEAECASMV
201: NSNKIKDMSH DIAEMRDAAE RLNSDAARKK EEEEQIKEES IALRETYVCK KLEAKQRLED LKRDCDPELK KDIEELMEIS TENERLQEEI KLSGELKEAK
301: SAMQEIYDEE SSYKSLVGSL TVELDGVQRE NRELKGKEKE RQEAEEGEWV EASRKVDEIM REAEKTRKEA EEMRMNVDEL RREAAAKHMV MGEAVKQLEI
401: VGRAVEKAKT AEKRAVEDMK VLTEKKESLT HDEPDKKIRI SLKEYEELRG KHEESERMVQ FKAKTVAAQL EEINESRIEG ERKLEEKIKE MEELKAAIDG
501: ALRKAEIAEE AHSIVDAELR KWKPQDL
101: LSDLDSAQRK AADLRVKLES IKHSRKCAIS TKHTMNQRLE QLQSENQETE STREDYILIT AELFMAKYEL AELKQQFNLS VEERLAELQR AEEAECASMV
201: NSNKIKDMSH DIAEMRDAAE RLNSDAARKK EEEEQIKEES IALRETYVCK KLEAKQRLED LKRDCDPELK KDIEELMEIS TENERLQEEI KLSGELKEAK
301: SAMQEIYDEE SSYKSLVGSL TVELDGVQRE NRELKGKEKE RQEAEEGEWV EASRKVDEIM REAEKTRKEA EEMRMNVDEL RREAAAKHMV MGEAVKQLEI
401: VGRAVEKAKT AEKRAVEDMK VLTEKKESLT HDEPDKKIRI SLKEYEELRG KHEESERMVQ FKAKTVAAQL EEINESRIEG ERKLEEKIKE MEELKAAIDG
501: ALRKAEIAEE AHSIVDAELR KWKPQDL
Arabidopsis Description
Putative WEB family protein At4g17210 [Source:UniProtKB/Swiss-Prot;Acc:O23564]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.