Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90485 | Canola | cytosol | 76.85 | 76.42 |
| CDY09639 | Canola | cytosol | 76.47 | 75.89 |
| CDY42964 | Canola | cytosol | 74.0 | 75.0 |
| Bra026233.1-P | Field mustard | cytosol | 74.0 | 74.86 |
| CDY50127 | Canola | cytosol | 72.68 | 73.23 |
| Bra021064.1-P | Field mustard | cytosol | 72.3 | 73.13 |
| CDY58167 | Canola | cytosol | 71.92 | 72.88 |
| CDY35594 | Canola | nucleus | 70.78 | 71.32 |
| AT1G12150.2 | Thale cress | cytosol | 36.05 | 34.67 |
| KRH51206 | Soybean | cytosol | 33.59 | 32.18 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 34.16 | 31.2 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 33.21 | 30.49 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 33.21 | 30.38 |
| PGSC0003DMT400050839 | Potato | nucleus | 30.93 | 26.25 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 22.39 | 26.16 |
| Solyc04g015110.2.1 | Tomato | plastid | 30.93 | 26.16 |
| Os12t0271600-01 | Rice | plasma membrane | 31.88 | 25.97 |
| OQU79020 | Sorghum | nucleus | 31.5 | 25.5 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 30.36 | 25.24 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 30.36 | 25.24 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 30.36 | 25.16 |
| Zm00001d023629_P001 | Maize | nucleus | 30.74 | 24.85 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 29.03 | 24.84 |
| Zm00001d041088_P004 | Maize | nucleus | 30.17 | 24.5 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 28.27 | 24.31 |
| AT5G55860.1 | Thale cress | nucleus | 28.84 | 23.42 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 28.65 | 23.41 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 28.27 | 23.32 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 28.27 | 23.32 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 28.08 | 23.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.05 | 20.85 |
| AT5G42880.1 | Thale cress | nucleus | 22.39 | 15.71 |
| AT4G33390.1 | Thale cress | nucleus | 22.77 | 15.4 |
| AT2G26570.1 | Thale cress | nucleus | 22.58 | 14.75 |
| AT1G45545.2 | Thale cress | nucleus | 20.3 | 14.21 |
Protein Annotations
| MapMan:35.1 | EntrezGene:827432 | ProteinID:AEE83862.1 | ArrayExpress:AT4G17210 | EnsemblPlantsGene:AT4G17210 | RefSeq:AT4G17210 |
| TAIR:AT4G17210 | RefSeq:AT4G17210-TAIR-G | EnsemblPlants:AT4G17210.1 | TAIR:AT4G17210.1 | ProteinID:CAB10502.1 | ProteinID:CAB78724.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0008150 | GO:GO:0009903 | GO:GO:0009904 | GO:GO:0009987 | GO:GO:0016043 |
| RefSeq:NP_193454.1 | UniProt:O23564 | PFAM:PF05701 | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF3 | UniParc:UPI000009C761 |
| InterPro:Web | SEG:seg | : | : | : | : |
Description
Putative WEB family protein At4g17210 [Source:UniProtKB/Swiss-Prot;Acc:O23564]
Coordinates
chr4:-:9652415..9654309
Molecular Weight (calculated)
60520.6 Da
IEP (calculated)
4.758
GRAVY (calculated)
-0.923
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIRTDAPV MPPETPPRSS EVGEIDTRAP FQSVRDALSL FRQVSFSKKQ PPRLSSSSSS QSQDTTTDVS DKEMQLLLAE QEMDRVKICL DGSVAAKAQA
101: LSDLDSAQRK AADLRVKLES IKHSRKCAIS TKHTMNQRLE QLQSENQETE STREDYILIT AELFMAKYEL AELKQQFNLS VEERLAELQR AEEAECASMV
201: NSNKIKDMSH DIAEMRDAAE RLNSDAARKK EEEEQIKEES IALRETYVCK KLEAKQRLED LKRDCDPELK KDIEELMEIS TENERLQEEI KLSGELKEAK
301: SAMQEIYDEE SSYKSLVGSL TVELDGVQRE NRELKGKEKE RQEAEEGEWV EASRKVDEIM REAEKTRKEA EEMRMNVDEL RREAAAKHMV MGEAVKQLEI
401: VGRAVEKAKT AEKRAVEDMK VLTEKKESLT HDEPDKKIRI SLKEYEELRG KHEESERMVQ FKAKTVAAQL EEINESRIEG ERKLEEKIKE MEELKAAIDG
501: ALRKAEIAEE AHSIVDAELR KWKPQDL
101: LSDLDSAQRK AADLRVKLES IKHSRKCAIS TKHTMNQRLE QLQSENQETE STREDYILIT AELFMAKYEL AELKQQFNLS VEERLAELQR AEEAECASMV
201: NSNKIKDMSH DIAEMRDAAE RLNSDAARKK EEEEQIKEES IALRETYVCK KLEAKQRLED LKRDCDPELK KDIEELMEIS TENERLQEEI KLSGELKEAK
301: SAMQEIYDEE SSYKSLVGSL TVELDGVQRE NRELKGKEKE RQEAEEGEWV EASRKVDEIM REAEKTRKEA EEMRMNVDEL RREAAAKHMV MGEAVKQLEI
401: VGRAVEKAKT AEKRAVEDMK VLTEKKESLT HDEPDKKIRI SLKEYEELRG KHEESERMVQ FKAKTVAAQL EEINESRIEG ERKLEEKIKE MEELKAAIDG
501: ALRKAEIAEE AHSIVDAELR KWKPQDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.