CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36620	Soybean	cytosol, mitochondrion, nucleus	85.42	85.27
KRH51206	Soybean	cytosol	56.08	58.73
KRH01945	Soybean	cytosol, mitochondrion, nucleus	57.12	57.32
AT1G12150.2	Thale cress	cytosol	40.97	43.07
CDY31245	Canola	cytosol	39.76	41.79
CDY21038	Canola	cytosol	39.41	41.5
Bra016786.1-P	Field mustard	cytosol	39.24	41.32
PGSC0003DMT400050839	Potato	nucleus	40.1	37.2
Solyc04g015110.2.1	Tomato	plastid	40.1	37.08
KRG98464	Soybean	mitochondrion	42.01	37.06
OQU79020	Sorghum	nucleus	41.67	36.87
KRH46399	Soybean	cytosol	41.67	36.75
Zm00001d041088_P004	Maize	nucleus	41.15	36.52
Zm00001d023629_P001	Maize	nucleus	41.15	36.35
GSMUA_Achr4P18510_001	Banana	nucleus	38.37	36.05
GSMUA_Achr7P16580_001	Banana	cytosol	38.54	36.04
Os12t0271600-01	Rice	plasma membrane	40.28	35.86
TraesCS5B01G103500.1	Wheat	nucleus	39.58	35.68
TraesCS5A01G098800.2	Wheat	cytosol	39.41	35.52
TraesCS4B01G127500.1	Wheat	nucleus	38.72	35.17
PGSC0003DMT400034621	Potato	mitochondrion, plastid	27.43	35.03
KRH73920	Soybean	nucleus	39.41	34.98
TraesCS4D01G125200.1	Wheat	nucleus	38.37	34.86
TraesCS5D01G110400.2	Wheat	cytosol	38.54	34.74
TraesCS4A01G188200.1	Wheat	nucleus	38.19	34.59
HORVU5Hr1G029890.1	Barley	nucleus	38.54	34.42
AT4G17210.1	Thale cress	cytosol, plastid	30.38	33.21
CDY35594	Canola	nucleus	30.03	33.08
CDY58167	Canola	cytosol	29.86	33.08
Bra026233.1-P	Field mustard	cytosol	29.86	33.01
CDY42964	Canola	cytosol	29.69	32.88
GSMUA_AchrUn_...	Banana	nucleus	35.94	32.7
Bra021064.1-P	Field mustard	cytosol	29.34	32.44
CDY09639	Canola	cytosol	29.86	32.39
CDX90485	Canola	cytosol	29.69	32.26
CDY50127	Canola	cytosol	28.82	31.74
KRH75103	Soybean	nucleus	12.33	29.58
CDY15972	Canola	cytosol	40.45	25.98
Bra026987.1-P	Field mustard	cytosol	41.15	23.49
CDY26542	Canola	cytosol	40.45	23.09
KRH07566	Soybean	nucleus	20.83	19.51
KRH45361	Soybean	nucleus	19.1	18.77
KRH61284	Soybean	nucleus	25.52	15.11
KRH51982	Soybean	nucleus	24.48	14.8
KRH15355	Soybean	nucleus	24.13	13.76

Protein Annotations

EntrezGene:100818297	MapMan:35.1	EMBL:ACUP02009228	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G120700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	UniProt:I1MFT1	EnsemblPlants:KRH11615	ProteinID:KRH11615
ProteinID:KRH11615.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF20	UniParc:UPI000233ABDA	InterPro:Web
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:9548240..9551909

Molecular Weight (calculated)

65448.7 Da

IEP (calculated)

4.623

GRAVY (calculated)

-0.894

Length

576 amino acids

Sequence
(BLAST)

001: MSFRIRDQER DTDSPREAGE IDTRAPFQSV KAAVSLFGEV AVSKEKRSIK RRSSENVLEK ETQLLLAQRE LNKIKKQLES AENTKSKALS ELDKANVTLQ
101: ELTKKLNSVR ESKQSAIEAA EAVKNQAKEL EQALSQKAIG YEAWKQELEH ARKEYTTTVK ELDASKQELN KIRQDFDTAL EAKLAAFQTA GEAQRSAKLN
201: TEKLHELKNQ VATMKEQIEH LKLASSQAQE DQAKAMEERE ARLSFYENAK EEAQNKLIAL KNEYEPELTQ SLEAKLAETS EEIQVLQKQI QEAHASEMDS
301: VRLITLEIKE ATKTLQEVAE EESSLRDLVD SLRKELEQVK KEQEELKEKE KAAEALAVDL TDQLQSKPEE TMDKESDNID EIELKIKHLS FETETARREE
401: EEMRSKTQEL KQEAEKSKAV AEELEKKLEL YLKQAEEAKA AEQRAIEEMK MMSDSDNTQD TVSVADSNGK IVLTVDEFAA LSGKIKESED LIDRTETAVM
501: AQVEAINTRK NEVDRKVEAN LKAIEEIKAA TDMALRNAEM ADSAKVAVEG ELKKWRQEEQ NLDYSDNSSR PISLRI

Best Arabidopsis Sequence Match ( AT1G12150.2 )
(BLAST)

001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA

Arabidopsis Description

WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.