CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51206	Soybean	cytosol	86.06	89.82
KRH36620	Soybean	cytosol, mitochondrion, nucleus	57.67	57.37
KRH11615	Soybean	cytosol, mitochondrion, nucleus	57.32	57.12
AT1G12150.2	Thale cress	cytosol	40.07	41.97
Bra016786.1-P	Field mustard	cytosol	39.9	41.86
CDY21038	Canola	cytosol	39.9	41.86
CDY31245	Canola	cytosol	39.72	41.61
OQU79020	Sorghum	nucleus	39.2	34.56
TraesCS4B01G127500.1	Wheat	nucleus	38.15	34.54
KRG98464	Soybean	mitochondrion	39.2	34.46
TraesCS4D01G125200.1	Wheat	nucleus	37.98	34.38
Zm00001d041088_P004	Maize	nucleus	38.85	34.36
Os12t0271600-01	Rice	plasma membrane	38.68	34.31
Zm00001d023629_P001	Maize	nucleus	38.85	34.2
TraesCS4A01G188200.1	Wheat	nucleus	37.8	34.12
PGSC0003DMT400050839	Potato	nucleus	36.76	33.98
GSMUA_Achr7P16580_001	Banana	cytosol	36.41	33.93
KRH46399	Soybean	cytosol	38.5	33.84
PGSC0003DMT400034621	Potato	mitochondrion, plastid	26.48	33.7
CDY42964	Canola	cytosol	30.31	33.46
CDY58167	Canola	cytosol	30.14	33.27
Solyc04g015110.2.1	Tomato	plastid	36.06	33.23
AT4G17210.1	Thale cress	cytosol, plastid	30.49	33.21
TraesCS5B01G103500.1	Wheat	nucleus	36.93	33.18
GSMUA_Achr4P18510_001	Banana	nucleus	35.37	33.12
CDY35594	Canola	nucleus	30.14	33.08
CDX90485	Canola	cytosol	30.49	33.02
Bra021064.1-P	Field mustard	cytosol	29.97	33.01
CDY09639	Canola	cytosol	30.49	32.96
TraesCS5A01G098800.2	Wheat	cytosol	36.59	32.86
Bra026233.1-P	Field mustard	cytosol	29.79	32.82
TraesCS5D01G110400.2	Wheat	cytosol	36.41	32.71
KRH73920	Soybean	nucleus	36.41	32.2
CDY50127	Canola	cytosol	29.27	32.12
HORVU5Hr1G029890.1	Barley	nucleus	35.37	31.47
GSMUA_AchrUn_...	Banana	nucleus	33.28	30.17
KRH75103	Soybean	nucleus	11.15	26.67
CDY15972	Canola	cytosol	39.2	25.08
Bra026987.1-P	Field mustard	cytosol	39.72	22.6
CDY26542	Canola	cytosol	39.02	22.2
KRH07566	Soybean	nucleus	19.34	18.05
KRH45361	Soybean	nucleus	18.12	17.75
KRH51982	Soybean	nucleus	23.17	13.96
KRH61284	Soybean	nucleus	23.17	13.67
KRH15355	Soybean	nucleus	23.17	13.17

Protein Annotations

EntrezGene:100796853	MapMan:35.1	EMBL:ACUP02010293	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G005200	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	UniProt:I1MQX2	EnsemblPlants:KRH01945	ProteinID:KRH01945
ProteinID:KRH01945.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF20	UniParc:UPI000233EDC3	InterPro:Web
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:487874..490633

Molecular Weight (calculated)

64705.2 Da

IEP (calculated)

6.581

GRAVY (calculated)

-0.682

Length

574 amino acids

Sequence
(BLAST)

001: MNGHKKLNSP RGEVGEIDTR APFQSVKAAV SLFGEVAITR DRFSVKRRSS ENVFEKETQL ILAQKELNKI KKQVDNAEAI KAKALSELEN AKEILQSLTS
101: KLANVRECKQ SAMQAAELVR NQSKRFEKTL SLKAVGYEAW RKELEHARKA YTTTITELDS SKQELTKIRQ DFDAVLEAKL AALQAAGEAQ RSAKLNSERI
201: SELSNEIATM KASIEQVRLA SEQSQEESEA QLVGYYKTAK EEAQKNLESL KNEYDTELMQ SLDAKLAQTS AEIEFLQEQI KKLHASKMDS VRLLTSELKE
301: ATKTLEEVAE EKNSLKKLVF SLRTELKQVK KEQDEVKEKG HIAEALAANL TGKLQGSMRD ARPKPGTVDD LEANMFYVQS AKIRKLQLET EGAIREAEET
401: RRKVQELKQE VEKSRAVAEE AEEKLELVLV EAKEAKAAEQ RAVKEMKILS EVGRVPYSKF NGKIKMSNEE FEALRAKAKE CEDLVEKKEA IVMAELQEIY
501: ARKNEVDRKV ETNLKAIEET KAAEETALWS AEMADSAKVA IESELRRWHQ QQQKVIPGAA SQKLEHSAAP ILTI

Best Arabidopsis Sequence Match ( AT1G12150.2 )
(BLAST)

001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA

Arabidopsis Description

WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.