Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26570.1 | KRH07566 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | KRH15355 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | KRH45361 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | KRH51982 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | KRH61284 | AT2G26570.1 | 20974974 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61284 | Soybean | nucleus | 74.5 | 72.97 |
| Solyc05g042150.1.1 | Tomato | cytosol | 13.64 | 67.71 |
| Solyc07g026880.1.1 | Tomato | cytosol | 9.97 | 61.69 |
| Bra034308.1-P | Field mustard | nucleus | 41.66 | 61.36 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 50.37 | 56.87 |
| CDY48180 | Canola | nucleus | 43.76 | 56.5 |
| Solyc04g078950.1.1 | Tomato | nucleus | 17.42 | 54.43 |
| CDX77048 | Canola | nucleus | 42.92 | 54.03 |
| AT2G26570.1 | Thale cress | nucleus | 45.54 | 53.78 |
| KRH07566 | Soybean | nucleus | 32.74 | 50.73 |
| AT4G33390.1 | Thale cress | nucleus | 41.45 | 50.71 |
| Solyc07g022910.2.1 | Tomato | plastid | 44.39 | 49.94 |
| PGSC0003DMT400039921 | Potato | nucleus | 44.81 | 49.88 |
| CDY46119 | Canola | nucleus | 35.47 | 49.78 |
| KRH45361 | Soybean | nucleus | 30.22 | 49.15 |
| CDX72400 | Canola | nucleus | 35.05 | 49.12 |
| Solyc12g088830.1.1 | Tomato | nucleus | 43.44 | 49.11 |
| Bra041137.1-P | Field mustard | nucleus | 28.86 | 49.02 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 40.5 | 47.89 |
| PGSC0003DMT400011385 | Potato | nucleus | 44.81 | 47.29 |
| KRH15355 | Soybean | nucleus | 49.53 | 46.73 |
| Solyc08g015840.1.1 | Tomato | cytosol | 9.44 | 45.92 |
| PGSC0003DMT400020677 | Potato | nucleus | 45.44 | 44.64 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 40.61 | 44.13 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 33.05 | 43.93 |
| CDY22380 | Canola | nucleus | 32.53 | 43.12 |
| Bra033647.1-P | Field mustard | nucleus | 32.53 | 43.0 |
| CDX71526 | Canola | nucleus | 32.32 | 42.54 |
| Os03t0395300-01 | Rice | plasma membrane | 34.63 | 42.53 |
| Zm00001d029420_P002 | Maize | nucleus | 34.94 | 42.47 |
| CDY17108 | Canola | nucleus | 32.53 | 42.41 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 35.15 | 42.24 |
| Bra040259.1-P | Field mustard | nucleus | 32.21 | 41.94 |
| CDY17054 | Canola | nucleus | 31.16 | 41.83 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 34.73 | 41.74 |
| Bra014049.1-P | Field mustard | nucleus | 32.95 | 41.64 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 33.37 | 41.62 |
| AT5G42880.1 | Thale cress | nucleus | 32.74 | 41.54 |
| AT1G45545.2 | Thale cress | nucleus | 32.74 | 41.43 |
| CDY62582 | Canola | nucleus | 31.79 | 41.39 |
| GSMUA_Achr10P... | Banana | cytosol | 35.36 | 41.35 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 36.41 | 41.26 |
| EER92167 | Sorghum | nucleus | 33.68 | 40.94 |
| CDY43212 | Canola | nucleus | 30.64 | 40.9 |
| Zm00001d022161_P001 | Maize | nucleus | 34.21 | 40.75 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 33.26 | 40.64 |
| Zm00001d047240_P002 | Maize | nucleus | 33.26 | 40.38 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 34.73 | 40.37 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 35.57 | 40.31 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 34.31 | 39.78 |
| KXG36701 | Sorghum | nucleus | 34.0 | 39.27 |
| Os07t0619100-01 | Rice | plasma membrane | 33.47 | 39.05 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 24.66 | 37.42 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 19.62 | 36.96 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 34.0 | 35.84 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 27.91 | 30.75 |
| KRH75103 | Soybean | nucleus | 6.72 | 26.67 |
| KRG98464 | Soybean | mitochondrion | 18.26 | 26.65 |
| KRH46399 | Soybean | cytosol | 17.84 | 26.03 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 15.11 | 24.96 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 14.8 | 24.48 |
| KRH73920 | Soybean | nucleus | 16.58 | 24.35 |
| KRH51206 | Soybean | cytosol | 13.54 | 23.45 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 13.96 | 23.17 |
Protein Annotations
| EntrezGene:100786543 | MapMan:20.5.8.1 | EMBL:ACUP02003402 | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G039600 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0009903 |
| GO:GO:0009904 | GO:GO:0009987 | GO:GO:0016043 | UniProt:K7KSY8 | EnsemblPlants:KRH51982 | ProteinID:KRH51982 |
| ProteinID:KRH51982.1 | ProteinID:KRH51983.1 | ProteinID:KRH51984.1 | ProteinID:KRH51985.1 | PFAM:PF05701 | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF2 | UniParc:UPI0002339BCE | InterPro:Web | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:2995083..3000503
Molecular Weight (calculated)
104520.0 Da
IEP (calculated)
4.543
GRAVY (calculated)
-0.717
Length
953 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVEDKIPP VSSSKIAEET PLVEHVGDKL PSESSPKIAE ETPLAEHVGD KLPSEASPKI AEETPLAEHV GDKLPSEFSS EIVEETLLAE HVGDNQPSAS
101: SLKIDEETPL AEHVIDNSES SSKTAEELPL VEHVIDKLPS ESTTKIAGDM PLADPPEENT EVINPHGDQS STEAPTIPLS NGKMEPGTHL PVDEFSELAV
201: LPNASVDQTL IQDAAVDVTE KSQQVTSAED SEPGAIENVS DMHESQDDVS NITADSDVDN EIRLSASSSE TKDLQSDHNE LTMAMGTVGS LPRAKLFDAK
301: RGHIDTTAPF ESVKEAVSKF GGIVDWKAHR IHTVERRTLV EQELEKAQED IPEYKKQAEA AEQEKGQVLK ELDSTKRLIE ELKLNLERAQ TEERQARQDS
401: ELAKLRVEEM EQGIADESSV AAKAQLEVAK ARYTAAVSDL IAVKEELAAL HKEYASLVTD RDVAIKKAEE AVAASKEVEK SVEDLTVELI AAKESLETTH
501: AAHLEAEEQR IGTVMARDQD SLNWEKELKQ AEEELQRLNQ QISSAKELKS KLETASALLI DLKAELTAYM ESKLKQEGGP EESEKKTHTD IQEAVASARK
601: ELEEVNLNIE KATAEVTILK VAATSLKSEL EQEKSTLASI RQREGMASIA VASLEAELEK TRSEIALVQM KEKEAKEKMT ELPKKLQLTA EETNEANLLA
701: QAAREELQKV KAEAEQAKAG VSTFQSRLLA AQKEIEAAKA SENLAIAAIK ALQESESTRS KNQVDPSNGV TLSLEEYYEL SKRAHEAEER ANMRVAAANS
801: EIDKAKESEL KAFEKLDEVN REIAARRESL KLAMEKAEKA KEGKLGVEQE LRNWRAESEQ RRKASESGQG VVNQGKSPRG SFEGNQGVNN FDRTSDAGNP
901: AHFMTSPKAN VQADNDEGGS SPESKHGKKK KKSIFPRVLM FFARRKTHST KSG
101: SLKIDEETPL AEHVIDNSES SSKTAEELPL VEHVIDKLPS ESTTKIAGDM PLADPPEENT EVINPHGDQS STEAPTIPLS NGKMEPGTHL PVDEFSELAV
201: LPNASVDQTL IQDAAVDVTE KSQQVTSAED SEPGAIENVS DMHESQDDVS NITADSDVDN EIRLSASSSE TKDLQSDHNE LTMAMGTVGS LPRAKLFDAK
301: RGHIDTTAPF ESVKEAVSKF GGIVDWKAHR IHTVERRTLV EQELEKAQED IPEYKKQAEA AEQEKGQVLK ELDSTKRLIE ELKLNLERAQ TEERQARQDS
401: ELAKLRVEEM EQGIADESSV AAKAQLEVAK ARYTAAVSDL IAVKEELAAL HKEYASLVTD RDVAIKKAEE AVAASKEVEK SVEDLTVELI AAKESLETTH
501: AAHLEAEEQR IGTVMARDQD SLNWEKELKQ AEEELQRLNQ QISSAKELKS KLETASALLI DLKAELTAYM ESKLKQEGGP EESEKKTHTD IQEAVASARK
601: ELEEVNLNIE KATAEVTILK VAATSLKSEL EQEKSTLASI RQREGMASIA VASLEAELEK TRSEIALVQM KEKEAKEKMT ELPKKLQLTA EETNEANLLA
701: QAAREELQKV KAEAEQAKAG VSTFQSRLLA AQKEIEAAKA SENLAIAAIK ALQESESTRS KNQVDPSNGV TLSLEEYYEL SKRAHEAEER ANMRVAAANS
801: EIDKAKESEL KAFEKLDEVN REIAARRESL KLAMEKAEKA KEGKLGVEQE LRNWRAESEQ RRKASESGQG VVNQGKSPRG SFEGNQGVNN FDRTSDAGNP
901: AHFMTSPKAN VQADNDEGGS SPESKHGKKK KKSIFPRVLM FFARRKTHST KSG
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Arabidopsis Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.